Hb_002243_030

Information

Type -
Description -
Location Contig2243: 48025-53207
Sequence    

Annotation

kegg
ID rcu:RCOM_1767510
description Protein regulator of cytokinesis, putative
nr
ID XP_012079804.1
description PREDICTED: 65-kDa microtubule-associated protein 3-like isoform X1 [Jatropha curcas]
swissprot
ID Q9FHM4
description 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1
trembl
ID A0A067K8W6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15429 PE=4 SV=1
Gene Ontology
ID GO:0008017
description 65-kda microtubule-associated protein 3-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23334: 47874-51326
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002243_030 0.0 - - PREDICTED: 65-kDa microtubule-associated protein 3-like isoform X1 [Jatropha curcas]
2 Hb_023344_100 0.0651581887 - - PREDICTED: subtilisin-like protease SBT1.2 [Jatropha curcas]
3 Hb_015299_040 0.0680838285 transcription factor TF Family: MYB PREDICTED: myb-related protein 308 [Jatropha curcas]
4 Hb_001357_160 0.0754040486 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004109_100 0.0761487941 - - Interactor of constitutive active rops 1 isoform 1 [Theobroma cacao]
6 Hb_003777_260 0.0796723866 - - PREDICTED: uncharacterized protein LOC105640927 isoform X4 [Jatropha curcas]
7 Hb_002170_060 0.0942629169 - - PREDICTED: mitogen-activated protein kinase-binding protein 1 [Jatropha curcas]
8 Hb_158845_010 0.0947803157 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 [Jatropha curcas]
9 Hb_000664_080 0.1003534832 - - PREDICTED: NADP-dependent malic enzyme isoform X2 [Jatropha curcas]
10 Hb_000340_550 0.1006789027 - - PREDICTED: rho GTPase-activating protein 2 [Jatropha curcas]
11 Hb_074240_030 0.1047824442 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 3-like [Jatropha curcas]
12 Hb_002918_220 0.1076082553 - - PREDICTED: uncharacterized protein LOC105138896 [Populus euphratica]
13 Hb_005568_140 0.1096274802 - - ATP binding protein, putative [Ricinus communis]
14 Hb_000010_320 0.1106419251 - - PREDICTED: protein STICHEL-like 2 [Jatropha curcas]
15 Hb_008643_220 0.1116644443 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Jatropha curcas]
16 Hb_001856_190 0.1120858173 - - SP1L, putative [Ricinus communis]
17 Hb_001439_240 0.1138940183 transcription factor TF Family: MYB hypothetical protein POPTR_0017s12230g [Populus trichocarpa]
18 Hb_004459_030 0.1157888279 - - PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]
19 Hb_007574_020 0.1190298383 - - PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
20 Hb_002045_160 0.1195584009 - - PREDICTED: DJ-1 protein homolog E-like [Jatropha curcas]

Gene co-expression network

sample Hb_002243_030 Hb_002243_030 Hb_023344_100 Hb_023344_100 Hb_002243_030--Hb_023344_100 Hb_015299_040 Hb_015299_040 Hb_002243_030--Hb_015299_040 Hb_001357_160 Hb_001357_160 Hb_002243_030--Hb_001357_160 Hb_004109_100 Hb_004109_100 Hb_002243_030--Hb_004109_100 Hb_003777_260 Hb_003777_260 Hb_002243_030--Hb_003777_260 Hb_002170_060 Hb_002170_060 Hb_002243_030--Hb_002170_060 Hb_023344_100--Hb_015299_040 Hb_023344_100--Hb_001357_160 Hb_023344_100--Hb_004109_100 Hb_158845_010 Hb_158845_010 Hb_023344_100--Hb_158845_010 Hb_074240_030 Hb_074240_030 Hb_023344_100--Hb_074240_030 Hb_015299_040--Hb_158845_010 Hb_000010_320 Hb_000010_320 Hb_015299_040--Hb_000010_320 Hb_015299_040--Hb_074240_030 Hb_015299_040--Hb_001357_160 Hb_054615_010 Hb_054615_010 Hb_015299_040--Hb_054615_010 Hb_001357_160--Hb_074240_030 Hb_001357_160--Hb_158845_010 Hb_001856_190 Hb_001856_190 Hb_001357_160--Hb_001856_190 Hb_001357_160--Hb_000010_320 Hb_005568_140 Hb_005568_140 Hb_004109_100--Hb_005568_140 Hb_002918_220 Hb_002918_220 Hb_004109_100--Hb_002918_220 Hb_004109_100--Hb_003777_260 Hb_004109_100--Hb_002170_060 Hb_004109_100--Hb_015299_040 Hb_000340_550 Hb_000340_550 Hb_003777_260--Hb_000340_550 Hb_005116_120 Hb_005116_120 Hb_003777_260--Hb_005116_120 Hb_181744_010 Hb_181744_010 Hb_003777_260--Hb_181744_010 Hb_001439_240 Hb_001439_240 Hb_003777_260--Hb_001439_240 Hb_005288_090 Hb_005288_090 Hb_003777_260--Hb_005288_090 Hb_008643_220 Hb_008643_220 Hb_002170_060--Hb_008643_220 Hb_000664_080 Hb_000664_080 Hb_002170_060--Hb_000664_080 Hb_002170_060--Hb_005568_140 Hb_002170_060--Hb_002918_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0990139 0.72007 22.7083 6.54977 0.0796809 0.0452114
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.103571 0 1.38133 4.05165

CAGE analysis