Hb_002249_150

Information

Type -
Description -
Location Contig2249: 152518-153626
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002249_150 0.0 - - -
2 Hb_000085_090 0.1789037684 - - hypothetical protein JCGZ_00955 [Jatropha curcas]
3 Hb_000366_190 0.224479023 - - Phosphoenolpyruvate carboxylase, putative [Ricinus communis]
4 Hb_000959_250 0.2258549564 - - PREDICTED: ribonucleoside-diphosphate reductase large subunit [Jatropha curcas]
5 Hb_000703_210 0.2309059555 - - Inactive protein kinase [Gossypium arboreum]
6 Hb_030736_070 0.2405236946 - - PREDICTED: general transcription factor IIH subunit 3 isoform X2 [Jatropha curcas]
7 Hb_006483_010 0.2419272657 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
8 Hb_001054_020 0.2437601516 - - glutamine synthetase [Hevea brasiliensis]
9 Hb_073973_160 0.243870194 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]
10 Hb_002498_050 0.2443543903 - - PREDICTED: aspartic proteinase-like [Jatropha curcas]
11 Hb_003050_370 0.2454414737 - - mitochondrial inner membrane protease subunit, putative [Ricinus communis]
12 Hb_143243_010 0.245589356 - - PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas]
13 Hb_030736_060 0.2458613119 - - PREDICTED: lysM domain-containing GPI-anchored protein 1 [Jatropha curcas]
14 Hb_001492_010 0.246082714 - - PREDICTED: diacylglycerol kinase 3-like isoform X2 [Populus euphratica]
15 Hb_015026_060 0.2472652794 - - PREDICTED: uncharacterized protein LOC105649473 [Jatropha curcas]
16 Hb_000035_200 0.2481896608 - - PREDICTED: phospholipase D Z-like [Jatropha curcas]
17 Hb_004770_050 0.2496169158 - - PREDICTED: serine carboxypeptidase-like 35 [Populus euphratica]
18 Hb_131035_010 0.2502507788 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_000009_480 0.2509383281 - - PREDICTED: BTB/POZ domain-containing protein At5g66560 [Jatropha curcas]
20 Hb_000215_190 0.252077701 - - PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Jatropha curcas]

Gene co-expression network

sample Hb_002249_150 Hb_002249_150 Hb_000085_090 Hb_000085_090 Hb_002249_150--Hb_000085_090 Hb_000366_190 Hb_000366_190 Hb_002249_150--Hb_000366_190 Hb_000959_250 Hb_000959_250 Hb_002249_150--Hb_000959_250 Hb_000703_210 Hb_000703_210 Hb_002249_150--Hb_000703_210 Hb_030736_070 Hb_030736_070 Hb_002249_150--Hb_030736_070 Hb_006483_010 Hb_006483_010 Hb_002249_150--Hb_006483_010 Hb_001492_010 Hb_001492_010 Hb_000085_090--Hb_001492_010 Hb_003050_370 Hb_003050_370 Hb_000085_090--Hb_003050_370 Hb_000085_090--Hb_000703_210 Hb_011206_010 Hb_011206_010 Hb_000085_090--Hb_011206_010 Hb_000085_090--Hb_000959_250 Hb_000213_070 Hb_000213_070 Hb_000085_090--Hb_000213_070 Hb_009119_030 Hb_009119_030 Hb_000366_190--Hb_009119_030 Hb_020805_010 Hb_020805_010 Hb_000366_190--Hb_020805_010 Hb_000062_030 Hb_000062_030 Hb_000366_190--Hb_000062_030 Hb_009485_020 Hb_009485_020 Hb_000366_190--Hb_009485_020 Hb_002320_070 Hb_002320_070 Hb_000366_190--Hb_002320_070 Hb_000749_110 Hb_000749_110 Hb_000366_190--Hb_000749_110 Hb_003897_040 Hb_003897_040 Hb_000959_250--Hb_003897_040 Hb_000648_100 Hb_000648_100 Hb_000959_250--Hb_000648_100 Hb_000868_060 Hb_000868_060 Hb_000959_250--Hb_000868_060 Hb_001832_130 Hb_001832_130 Hb_000959_250--Hb_001832_130 Hb_000959_250--Hb_003050_370 Hb_002398_030 Hb_002398_030 Hb_000959_250--Hb_002398_030 Hb_000703_210--Hb_001492_010 Hb_001369_350 Hb_001369_350 Hb_000703_210--Hb_001369_350 Hb_000703_210--Hb_003050_370 Hb_006478_060 Hb_006478_060 Hb_000703_210--Hb_006478_060 Hb_001085_320 Hb_001085_320 Hb_000703_210--Hb_001085_320 Hb_002374_320 Hb_002374_320 Hb_000703_210--Hb_002374_320 Hb_027760_070 Hb_027760_070 Hb_030736_070--Hb_027760_070 Hb_146081_010 Hb_146081_010 Hb_030736_070--Hb_146081_010 Hb_008143_070 Hb_008143_070 Hb_030736_070--Hb_008143_070 Hb_001033_050 Hb_001033_050 Hb_030736_070--Hb_001033_050 Hb_000457_140 Hb_000457_140 Hb_030736_070--Hb_000457_140 Hb_000237_190 Hb_000237_190 Hb_030736_070--Hb_000237_190 Hb_006483_010--Hb_000749_110 Hb_006483_010--Hb_000366_190 Hb_015026_060 Hb_015026_060 Hb_006483_010--Hb_015026_060 Hb_050686_010 Hb_050686_010 Hb_006483_010--Hb_050686_010 Hb_000261_520 Hb_000261_520 Hb_006483_010--Hb_000261_520 Hb_005271_080 Hb_005271_080 Hb_006483_010--Hb_005271_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.24337 1.24582 1.39392 3.23277 3.05984 2.16486
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.3082 0 0.752365 2.00722 0

CAGE analysis