Hb_002253_080

Information

Type -
Description -
Location Contig2253: 130727-148919
Sequence    

Annotation

kegg
ID rcu:RCOM_1461660
description phosphatidylinositol 4-kinase, putative (EC:2.7.1.67)
nr
ID XP_012066583.1
description PREDICTED: phosphatidylinositol 4-kinase beta 1-like [Jatropha curcas]
swissprot
ID Q9FMJ0
description Phosphatidylinositol 4-kinase beta 1 OS=Arabidopsis thaliana GN=PI4KB1 PE=1 SV=1
trembl
ID A0A067L2F3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24386 PE=4 SV=1
Gene Ontology
ID GO:0005622
description phosphatidylinositol 4-kinase beta 1-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23440: 132538-148713
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002253_080 0.0 - - PREDICTED: phosphatidylinositol 4-kinase beta 1-like [Jatropha curcas]
2 Hb_001322_130 0.0455887878 - - PREDICTED: putative glycerol-3-phosphate transporter 4 [Jatropha curcas]
3 Hb_008253_030 0.0457947411 - - PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
4 Hb_001767_140 0.0466438063 - - PREDICTED: protein-tyrosine-phosphatase MKP1 [Jatropha curcas]
5 Hb_031042_050 0.0542269979 - - PREDICTED: protein transport protein SEC16B homolog [Jatropha curcas]
6 Hb_002267_140 0.0557951078 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
7 Hb_002615_090 0.0561426647 - - PREDICTED: protein SMG7 isoform X1 [Jatropha curcas]
8 Hb_002235_300 0.0573204009 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15280 isoform X1 [Jatropha curcas]
9 Hb_000069_470 0.0581026876 - - PREDICTED: uncharacterized protein LOC105642863 isoform X1 [Jatropha curcas]
10 Hb_000866_460 0.0588162049 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like [Jatropha curcas]
11 Hb_000977_120 0.0600447312 - - PREDICTED: sister chromatid cohesion 1 protein 4 isoform X2 [Jatropha curcas]
12 Hb_003470_080 0.0603857923 transcription factor TF Family: SNF2 PREDICTED: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1 [Jatropha curcas]
13 Hb_000025_320 0.0609478909 - - PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Jatropha curcas]
14 Hb_003729_030 0.0636535305 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [Jatropha curcas]
15 Hb_001089_050 0.0642102544 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 4 [Jatropha curcas]
16 Hb_000479_220 0.0642328866 - - PREDICTED: uncharacterized protein LOC105644125 [Jatropha curcas]
17 Hb_000684_250 0.0644973888 - - PREDICTED: uncharacterized protein LOC105642172 [Jatropha curcas]
18 Hb_000170_150 0.0653970622 - - PREDICTED: uncharacterized protein LOC105638996 isoform X3 [Jatropha curcas]
19 Hb_001054_030 0.0660114593 transcription factor TF Family: NF-X1 PREDICTED: NF-X1-type zinc finger protein NFXL1 [Jatropha curcas]
20 Hb_002783_040 0.0664404176 transcription factor TF Family: IWS1 -

Gene co-expression network

sample Hb_002253_080 Hb_002253_080 Hb_001322_130 Hb_001322_130 Hb_002253_080--Hb_001322_130 Hb_008253_030 Hb_008253_030 Hb_002253_080--Hb_008253_030 Hb_001767_140 Hb_001767_140 Hb_002253_080--Hb_001767_140 Hb_031042_050 Hb_031042_050 Hb_002253_080--Hb_031042_050 Hb_002267_140 Hb_002267_140 Hb_002253_080--Hb_002267_140 Hb_002615_090 Hb_002615_090 Hb_002253_080--Hb_002615_090 Hb_001322_130--Hb_031042_050 Hb_000866_460 Hb_000866_460 Hb_001322_130--Hb_000866_460 Hb_001322_130--Hb_002267_140 Hb_000243_210 Hb_000243_210 Hb_001322_130--Hb_000243_210 Hb_019430_020 Hb_019430_020 Hb_001322_130--Hb_019430_020 Hb_008253_030--Hb_001767_140 Hb_008253_030--Hb_002267_140 Hb_001147_110 Hb_001147_110 Hb_008253_030--Hb_001147_110 Hb_000479_220 Hb_000479_220 Hb_008253_030--Hb_000479_220 Hb_002276_240 Hb_002276_240 Hb_008253_030--Hb_002276_240 Hb_001767_140--Hb_002267_140 Hb_140049_040 Hb_140049_040 Hb_001767_140--Hb_140049_040 Hb_000174_060 Hb_000174_060 Hb_001767_140--Hb_000174_060 Hb_003866_080 Hb_003866_080 Hb_001767_140--Hb_003866_080 Hb_000028_130 Hb_000028_130 Hb_031042_050--Hb_000028_130 Hb_000069_470 Hb_000069_470 Hb_031042_050--Hb_000069_470 Hb_001545_150 Hb_001545_150 Hb_031042_050--Hb_001545_150 Hb_004410_120 Hb_004410_120 Hb_031042_050--Hb_004410_120 Hb_138596_010 Hb_138596_010 Hb_002267_140--Hb_138596_010 Hb_002267_140--Hb_002276_240 Hb_002843_120 Hb_002843_120 Hb_002267_140--Hb_002843_120 Hb_000960_100 Hb_000960_100 Hb_002615_090--Hb_000960_100 Hb_003785_040 Hb_003785_040 Hb_002615_090--Hb_003785_040 Hb_002235_300 Hb_002235_300 Hb_002615_090--Hb_002235_300 Hb_000878_180 Hb_000878_180 Hb_002615_090--Hb_000878_180 Hb_002615_090--Hb_001767_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.5067 20.6704 9.68216 10.0666 13.203 14.3609
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.90464 7.6672 10.9496 9.42334 12.0785

CAGE analysis