Hb_002253_100

Information

Type -
Description -
Location Contig2253: 151103-158473
Sequence    

Annotation

kegg
ID rcu:RCOM_1460680
description hypothetical protein
nr
ID XP_012066588.1
description PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID A0A067L2B5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24390 PE=4 SV=1
Gene Ontology
ID GO:0005634
description o-fucosyltransferase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23443: 153065-155866 , PASA_asmbl_23446: 156527-156952
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002253_100 0.0 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
2 Hb_002739_050 0.0727381191 - - PREDICTED: uncharacterized aarF domain-containing protein kinase 1 isoform X2 [Jatropha curcas]
3 Hb_014109_040 0.0760608807 - - PREDICTED: probable folylpolyglutamate synthase [Jatropha curcas]
4 Hb_000272_020 0.0760991482 - - oxidoreductase, putative [Ricinus communis]
5 Hb_007576_080 0.076372195 - - PREDICTED: uncharacterized protein LOC105643972 [Jatropha curcas]
6 Hb_005697_060 0.0787820497 transcription factor TF Family: HB PREDICTED: pathogenesis-related homeodomain protein isoform X1 [Jatropha curcas]
7 Hb_003780_030 0.0817555467 - - PREDICTED: protein CMSS1 [Jatropha curcas]
8 Hb_006120_070 0.0828954768 - - PREDICTED: ER membrane protein complex subunit 6 [Jatropha curcas]
9 Hb_003428_030 0.0830135415 - - tRNA, putative [Ricinus communis]
10 Hb_003935_020 0.085885186 - - PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Jatropha curcas]
11 Hb_007163_070 0.0866912579 - - PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Jatropha curcas]
12 Hb_000960_060 0.0879413881 - - PREDICTED: ADP-ribosylation factor 1-like 2 [Jatropha curcas]
13 Hb_002534_150 0.0886206819 - - catalytic, putative [Ricinus communis]
14 Hb_001234_080 0.0890027702 - - PREDICTED: eyes absent homolog 2-like isoform X2 [Musa acuminata subsp. malaccensis]
15 Hb_001214_060 0.0903118518 - - PREDICTED: phosphoinositide phosphatase SAC8 [Jatropha curcas]
16 Hb_020581_010 0.0910549163 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_003125_120 0.0927017435 - - PREDICTED: TITAN-like protein [Jatropha curcas]
18 Hb_000093_160 0.094469149 - - PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X1 [Jatropha curcas]
19 Hb_008055_040 0.0944697254 - - PREDICTED: chromatin assembly factor 1 subunit FAS2 [Jatropha curcas]
20 Hb_001635_180 0.0948661775 - - PREDICTED: F-box/FBD/LRR-repeat protein At5g53840-like [Jatropha curcas]

Gene co-expression network

sample Hb_002253_100 Hb_002253_100 Hb_002739_050 Hb_002739_050 Hb_002253_100--Hb_002739_050 Hb_014109_040 Hb_014109_040 Hb_002253_100--Hb_014109_040 Hb_000272_020 Hb_000272_020 Hb_002253_100--Hb_000272_020 Hb_007576_080 Hb_007576_080 Hb_002253_100--Hb_007576_080 Hb_005697_060 Hb_005697_060 Hb_002253_100--Hb_005697_060 Hb_003780_030 Hb_003780_030 Hb_002253_100--Hb_003780_030 Hb_003428_030 Hb_003428_030 Hb_002739_050--Hb_003428_030 Hb_000093_160 Hb_000093_160 Hb_002739_050--Hb_000093_160 Hb_005618_160 Hb_005618_160 Hb_002739_050--Hb_005618_160 Hb_007672_060 Hb_007672_060 Hb_002739_050--Hb_007672_060 Hb_001586_040 Hb_001586_040 Hb_002739_050--Hb_001586_040 Hb_000589_120 Hb_000589_120 Hb_014109_040--Hb_000589_120 Hb_003125_120 Hb_003125_120 Hb_014109_040--Hb_003125_120 Hb_014109_040--Hb_007576_080 Hb_000563_230 Hb_000563_230 Hb_014109_040--Hb_000563_230 Hb_003935_020 Hb_003935_020 Hb_014109_040--Hb_003935_020 Hb_000334_280 Hb_000334_280 Hb_014109_040--Hb_000334_280 Hb_001579_270 Hb_001579_270 Hb_000272_020--Hb_001579_270 Hb_000329_140 Hb_000329_140 Hb_000272_020--Hb_000329_140 Hb_000103_080 Hb_000103_080 Hb_000272_020--Hb_000103_080 Hb_000003_080 Hb_000003_080 Hb_000272_020--Hb_000003_080 Hb_020581_010 Hb_020581_010 Hb_000272_020--Hb_020581_010 Hb_007576_080--Hb_003780_030 Hb_007576_080--Hb_000589_120 Hb_007423_040 Hb_007423_040 Hb_007576_080--Hb_007423_040 Hb_002652_030 Hb_002652_030 Hb_007576_080--Hb_002652_030 Hb_002585_040 Hb_002585_040 Hb_007576_080--Hb_002585_040 Hb_007163_070 Hb_007163_070 Hb_005697_060--Hb_007163_070 Hb_006120_070 Hb_006120_070 Hb_005697_060--Hb_006120_070 Hb_028227_020 Hb_028227_020 Hb_005697_060--Hb_028227_020 Hb_000465_090 Hb_000465_090 Hb_005697_060--Hb_000465_090 Hb_001662_150 Hb_001662_150 Hb_005697_060--Hb_001662_150 Hb_001534_120 Hb_001534_120 Hb_005697_060--Hb_001534_120 Hb_038172_010 Hb_038172_010 Hb_003780_030--Hb_038172_010 Hb_003525_010 Hb_003525_010 Hb_003780_030--Hb_003525_010 Hb_000317_240 Hb_000317_240 Hb_003780_030--Hb_000317_240 Hb_001481_090 Hb_001481_090 Hb_003780_030--Hb_001481_090 Hb_003780_030--Hb_014109_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.90769 3.12319 4.20244 4.49844 6.99012 5.3527
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.95942 9.42868 2.32963 4.77867 4.01937

CAGE analysis