Hb_002255_040

Information

Type -
Description -
Location Contig2255: 26226-31477
Sequence    

Annotation

kegg
ID rcu:RCOM_0574610
description biotin synthase, putative (EC:2.8.1.6)
nr
ID XP_012066183.1
description PREDICTED: biotin synthase [Jatropha curcas]
swissprot
ID P54967
description Biotin synthase OS=Arabidopsis thaliana GN=BIO2 PE=2 SV=1
trembl
ID A0A067LE92
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23762 PE=3 SV=1
Gene Ontology
ID GO:0004076
description biotin synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002255_040 0.0 - - PREDICTED: biotin synthase [Jatropha curcas]
2 Hb_006555_040 0.0914931129 - - PREDICTED: uncharacterized protein LOC105639405 [Jatropha curcas]
3 Hb_029142_030 0.0977666544 rubber biosynthesis Gene Name: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea brasiliensis]
4 Hb_011249_030 0.0985064807 - - PREDICTED: uncharacterized protein LOC105641285 [Jatropha curcas]
5 Hb_028207_020 0.1040718891 - - PREDICTED: uncharacterized protein LOC105650315 isoform X2 [Jatropha curcas]
6 Hb_003581_210 0.1043153579 transcription factor TF Family: Whirly PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic [Jatropha curcas]
7 Hb_000424_020 0.1048879352 - - Uncharacterized protein TCM_037386 [Theobroma cacao]
8 Hb_001930_030 0.1072393175 - - PREDICTED: 30S ribosomal protein S10, chloroplastic [Jatropha curcas]
9 Hb_000436_100 0.1089997121 - - PREDICTED: uncharacterized protein LOC105638514 [Jatropha curcas]
10 Hb_006326_050 0.1128721889 - - PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Jatropha curcas]
11 Hb_005975_010 0.1147680758 - - [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase, putative [Ricinus communis]
12 Hb_003849_040 0.1156564715 - - PREDICTED: serine/threonine-protein kinase AFC2-like [Jatropha curcas]
13 Hb_155025_010 0.1179908504 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
14 Hb_002870_020 0.1180692727 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X1 [Jatropha curcas]
15 Hb_000959_220 0.1194975057 - - zinc finger protein, putative [Ricinus communis]
16 Hb_000139_220 0.1212316705 - - leucine rich repeat-containing protein, putative [Ricinus communis]
17 Hb_001322_020 0.1220228599 - - PREDICTED: polycomb group protein VERNALIZATION 2-like isoform X2 [Populus euphratica]
18 Hb_000002_120 0.122598855 - - PREDICTED: uncharacterized protein LOC105782064 [Gossypium raimondii]
19 Hb_000140_440 0.1227705412 - - PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast [Jatropha curcas]
20 Hb_066967_020 0.1234371576 - - RAB6-interacting protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002255_040 Hb_002255_040 Hb_006555_040 Hb_006555_040 Hb_002255_040--Hb_006555_040 Hb_029142_030 Hb_029142_030 Hb_002255_040--Hb_029142_030 Hb_011249_030 Hb_011249_030 Hb_002255_040--Hb_011249_030 Hb_028207_020 Hb_028207_020 Hb_002255_040--Hb_028207_020 Hb_003581_210 Hb_003581_210 Hb_002255_040--Hb_003581_210 Hb_000424_020 Hb_000424_020 Hb_002255_040--Hb_000424_020 Hb_000140_440 Hb_000140_440 Hb_006555_040--Hb_000140_440 Hb_001930_030 Hb_001930_030 Hb_006555_040--Hb_001930_030 Hb_004994_080 Hb_004994_080 Hb_006555_040--Hb_004994_080 Hb_007263_010 Hb_007263_010 Hb_006555_040--Hb_007263_010 Hb_011386_050 Hb_011386_050 Hb_006555_040--Hb_011386_050 Hb_005975_010 Hb_005975_010 Hb_029142_030--Hb_005975_010 Hb_029142_030--Hb_011249_030 Hb_000002_120 Hb_000002_120 Hb_029142_030--Hb_000002_120 Hb_000436_100 Hb_000436_100 Hb_029142_030--Hb_000436_100 Hb_000340_130 Hb_000340_130 Hb_029142_030--Hb_000340_130 Hb_000287_050 Hb_000287_050 Hb_011249_030--Hb_000287_050 Hb_039605_010 Hb_039605_010 Hb_011249_030--Hb_039605_010 Hb_001277_280 Hb_001277_280 Hb_011249_030--Hb_001277_280 Hb_004128_200 Hb_004128_200 Hb_011249_030--Hb_004128_200 Hb_065755_030 Hb_065755_030 Hb_011249_030--Hb_065755_030 Hb_006326_050 Hb_006326_050 Hb_028207_020--Hb_006326_050 Hb_010367_030 Hb_010367_030 Hb_028207_020--Hb_010367_030 Hb_028207_020--Hb_065755_030 Hb_028207_020--Hb_003581_210 Hb_028207_020--Hb_011249_030 Hb_003581_210--Hb_011249_030 Hb_000983_120 Hb_000983_120 Hb_003581_210--Hb_000983_120 Hb_003581_210--Hb_039605_010 Hb_003581_210--Hb_004128_200 Hb_000424_020--Hb_000436_100 Hb_000424_020--Hb_029142_030 Hb_000424_020--Hb_011249_030 Hb_000424_020--Hb_001930_030 Hb_000003_300 Hb_000003_300 Hb_000424_020--Hb_000003_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.4803 12.6261 49.3195 9.54251 12.8608 12.3425
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.47703 8.54964 5.3239 8.22105 12.6283

CAGE analysis