Hb_002259_010

Information

Type -
Description -
Location Contig2259: 8838-9743
Sequence    

Annotation

kegg
ID rcu:RCOM_0613690
description hypothetical protein
nr
ID XP_002528533.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9LSF6
description Vacuolar iron transporter homolog 2.1 OS=Arabidopsis thaliana GN=At3g25190 PE=1 SV=1
trembl
ID B9SRB4
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0613690 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002259_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001195_540 0.2987452897 - - PREDICTED: J domain-containing protein required for chloroplast accumulation response 1 [Jatropha curcas]
3 Hb_000803_130 0.3037948161 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005539_120 0.3519896048 - - PREDICTED: probable LRR receptor-like protein kinase At1g51890 [Jatropha curcas]
5 Hb_052764_040 0.3618295411 - - syntaxin 125 family protein [Populus trichocarpa]
6 Hb_002733_010 0.3869791157 - - -
7 Hb_000011_090 0.4088797833 - - PREDICTED: uncharacterized protein OsI_027940-like [Jatropha curcas]
8 Hb_000212_480 0.4094562255 - - -
9 Hb_006569_070 0.4150379127 - - nucleic acid binding protein, putative [Ricinus communis]
10 Hb_044653_080 0.4301143236 - - Uncharacterized protein TCM_045144 [Theobroma cacao]
11 Hb_056196_040 0.4344642716 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002026_010 0.4344661192 transcription factor TF Family: mTERF hypothetical protein CICLE_v10020375mg [Citrus clementina]
13 Hb_002685_050 0.4363707987 transcription factor TF Family: LUG PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
14 Hb_002067_010 0.4472310763 - - conserved hypothetical protein [Ricinus communis]
15 Hb_007229_010 0.4480530318 - - PREDICTED: uncharacterized protein LOC105130855 [Populus euphratica]
16 Hb_007012_070 0.4489139275 - - PREDICTED: probable pectinesterase 53 [Jatropha curcas]
17 Hb_002382_020 0.4500271427 - - PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Jatropha curcas]
18 Hb_009083_040 0.4517125052 - - hypothetical protein JCGZ_12563 [Jatropha curcas]
19 Hb_000106_110 0.452837126 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
20 Hb_123304_010 0.4586328705 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]

Gene co-expression network

sample Hb_002259_010 Hb_002259_010 Hb_001195_540 Hb_001195_540 Hb_002259_010--Hb_001195_540 Hb_000803_130 Hb_000803_130 Hb_002259_010--Hb_000803_130 Hb_005539_120 Hb_005539_120 Hb_002259_010--Hb_005539_120 Hb_052764_040 Hb_052764_040 Hb_002259_010--Hb_052764_040 Hb_002733_010 Hb_002733_010 Hb_002259_010--Hb_002733_010 Hb_000011_090 Hb_000011_090 Hb_002259_010--Hb_000011_090 Hb_001087_020 Hb_001087_020 Hb_001195_540--Hb_001087_020 Hb_001512_020 Hb_001512_020 Hb_001195_540--Hb_001512_020 Hb_007904_140 Hb_007904_140 Hb_001195_540--Hb_007904_140 Hb_001195_540--Hb_005539_120 Hb_008768_030 Hb_008768_030 Hb_001195_540--Hb_008768_030 Hb_015609_020 Hb_015609_020 Hb_000803_130--Hb_015609_020 Hb_102699_010 Hb_102699_010 Hb_000803_130--Hb_102699_010 Hb_004079_020 Hb_004079_020 Hb_000803_130--Hb_004079_020 Hb_032225_020 Hb_032225_020 Hb_000803_130--Hb_032225_020 Hb_000803_130--Hb_001195_540 Hb_014430_010 Hb_014430_010 Hb_005539_120--Hb_014430_010 Hb_000130_450 Hb_000130_450 Hb_005539_120--Hb_000130_450 Hb_002382_020 Hb_002382_020 Hb_005539_120--Hb_002382_020 Hb_000181_190 Hb_000181_190 Hb_005539_120--Hb_000181_190 Hb_003038_250 Hb_003038_250 Hb_052764_040--Hb_003038_250 Hb_000700_030 Hb_000700_030 Hb_052764_040--Hb_000700_030 Hb_004449_140 Hb_004449_140 Hb_052764_040--Hb_004449_140 Hb_044653_080 Hb_044653_080 Hb_052764_040--Hb_044653_080 Hb_051997_020 Hb_051997_020 Hb_052764_040--Hb_051997_020 Hb_001214_190 Hb_001214_190 Hb_052764_040--Hb_001214_190 Hb_001221_270 Hb_001221_270 Hb_002733_010--Hb_001221_270 Hb_001913_020 Hb_001913_020 Hb_002733_010--Hb_001913_020 Hb_002102_020 Hb_002102_020 Hb_002733_010--Hb_002102_020 Hb_010174_080 Hb_010174_080 Hb_002733_010--Hb_010174_080 Hb_120155_010 Hb_120155_010 Hb_002733_010--Hb_120155_010 Hb_000062_350 Hb_000062_350 Hb_002733_010--Hb_000062_350 Hb_003659_020 Hb_003659_020 Hb_000011_090--Hb_003659_020 Hb_008035_050 Hb_008035_050 Hb_000011_090--Hb_008035_050 Hb_139691_010 Hb_139691_010 Hb_000011_090--Hb_139691_010 Hb_000392_290 Hb_000392_290 Hb_000011_090--Hb_000392_290 Hb_006569_070 Hb_006569_070 Hb_000011_090--Hb_006569_070 Hb_001789_170 Hb_001789_170 Hb_000011_090--Hb_001789_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0208974 0.154573 0 0 0.0859339
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0573956 0 0.0825018 0 0

CAGE analysis