Hb_002260_190

Information

Type -
Description -
Location Contig2260: 263758-266560
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002260_190 0.0 - - -
2 Hb_002022_050 0.0078589379 - - PREDICTED: O-acyltransferase WSD1-like isoform X1 [Populus euphratica]
3 Hb_000005_040 0.0713616588 - - PREDICTED: histone H2B.2 [Jatropha curcas]
4 Hb_002595_100 0.0914148366 - - heat-shock protein, putative [Ricinus communis]
5 Hb_002900_060 0.1064820104 - - CI small heat shock protein 2 [Prunus salicina]
6 Hb_001142_020 0.1189289825 - - -
7 Hb_155911_010 0.1247457189 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
8 Hb_000362_230 0.1367750741 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_079543_010 0.1517866892 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
10 Hb_002232_200 0.1636570717 - - PREDICTED: sugar carrier protein C-like [Jatropha curcas]
11 Hb_005730_080 0.1680614406 - - PREDICTED: 17.6 kDa class I heat shock protein-like [Solanum lycopersicum]
12 Hb_002141_010 0.1798136518 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
13 Hb_002073_070 0.1882350879 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
14 Hb_000227_110 0.1913077328 - - hypothetical protein CICLE_v10010500mg, partial [Citrus clementina]
15 Hb_000204_180 0.218468377 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
16 Hb_013394_090 0.2383521361 - - conserved hypothetical protein [Ricinus communis]
17 Hb_116436_010 0.2451522587 - - PREDICTED: uncharacterized protein LOC105766967 [Gossypium raimondii]
18 Hb_027751_050 0.252051502 - - hypothetical protein JCGZ_05887 [Jatropha curcas]
19 Hb_128287_010 0.2586170025 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
20 Hb_000005_120 0.2587477189 transcription factor TF Family: C2H2 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Jatropha curcas]

Gene co-expression network

sample Hb_002260_190 Hb_002260_190 Hb_002022_050 Hb_002022_050 Hb_002260_190--Hb_002022_050 Hb_000005_040 Hb_000005_040 Hb_002260_190--Hb_000005_040 Hb_002595_100 Hb_002595_100 Hb_002260_190--Hb_002595_100 Hb_002900_060 Hb_002900_060 Hb_002260_190--Hb_002900_060 Hb_001142_020 Hb_001142_020 Hb_002260_190--Hb_001142_020 Hb_155911_010 Hb_155911_010 Hb_002260_190--Hb_155911_010 Hb_002022_050--Hb_000005_040 Hb_002022_050--Hb_002595_100 Hb_002022_050--Hb_001142_020 Hb_002022_050--Hb_002900_060 Hb_002022_050--Hb_155911_010 Hb_000005_040--Hb_002900_060 Hb_000005_040--Hb_002595_100 Hb_002232_200 Hb_002232_200 Hb_000005_040--Hb_002232_200 Hb_000005_040--Hb_001142_020 Hb_002595_100--Hb_002900_060 Hb_002073_070 Hb_002073_070 Hb_002595_100--Hb_002073_070 Hb_005730_080 Hb_005730_080 Hb_002595_100--Hb_005730_080 Hb_002900_060--Hb_002073_070 Hb_002900_060--Hb_002232_200 Hb_001142_020--Hb_155911_010 Hb_000362_230 Hb_000362_230 Hb_001142_020--Hb_000362_230 Hb_079543_010 Hb_079543_010 Hb_001142_020--Hb_079543_010 Hb_002141_010 Hb_002141_010 Hb_001142_020--Hb_002141_010 Hb_000227_110 Hb_000227_110 Hb_001142_020--Hb_000227_110 Hb_000204_180 Hb_000204_180 Hb_001142_020--Hb_000204_180 Hb_155911_010--Hb_000362_230 Hb_155911_010--Hb_079543_010 Hb_155911_010--Hb_002141_010 Hb_155911_010--Hb_000227_110 Hb_155911_010--Hb_000204_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.127675 0.0186777
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis