Hb_002284_300

Information

Type -
Description -
Location Contig2284: 236477-240347
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002284_300 0.0 - - -
2 Hb_000599_120 0.1071748825 - - PREDICTED: putative E3 ubiquitin-protein ligase XBAT34 [Jatropha curcas]
3 Hb_150069_020 0.1080546254 - - PREDICTED: ribosome biogenesis regulatory protein homolog isoform X1 [Jatropha curcas]
4 Hb_054380_010 0.1086799868 - - -
5 Hb_000015_010 0.1091886299 - - -
6 Hb_002169_010 0.111095045 - - PREDICTED: la-related protein 6B [Jatropha curcas]
7 Hb_010866_040 0.1145572899 - - PREDICTED: metal transporter Nramp2-like [Jatropha curcas]
8 Hb_000729_050 0.1148177686 - - Pinin, putative [Ricinus communis]
9 Hb_003728_020 0.1162913136 - - conserved hypothetical protein [Ricinus communis]
10 Hb_018663_020 0.1170238585 - - PREDICTED: nuclear pore complex protein NUP1 isoform X2 [Jatropha curcas]
11 Hb_003352_050 0.1189208451 - - PREDICTED: uncharacterized protein LOC105643709 [Jatropha curcas]
12 Hb_000284_200 0.1192215821 - - -
13 Hb_000107_100 0.1202098115 - - hypothetical protein JCGZ_16208 [Jatropha curcas]
14 Hb_000077_050 0.1202312001 - - PREDICTED: elongation factor G-1, mitochondrial isoform X1 [Jatropha curcas]
15 Hb_002960_060 0.1208256579 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Jatropha curcas]
16 Hb_000491_080 0.1209654522 - - PREDICTED: F-box protein SKIP31 [Jatropha curcas]
17 Hb_012760_170 0.1209767632 - - PREDICTED: la-related protein 1C-like isoform X1 [Jatropha curcas]
18 Hb_002249_140 0.1210340915 - - PREDICTED: uncharacterized protein LOC105648715 [Jatropha curcas]
19 Hb_153547_010 0.1210945153 - - PREDICTED: protein FLX-like 4 [Jatropha curcas]
20 Hb_002007_250 0.1216544523 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002284_300 Hb_002284_300 Hb_000599_120 Hb_000599_120 Hb_002284_300--Hb_000599_120 Hb_150069_020 Hb_150069_020 Hb_002284_300--Hb_150069_020 Hb_054380_010 Hb_054380_010 Hb_002284_300--Hb_054380_010 Hb_000015_010 Hb_000015_010 Hb_002284_300--Hb_000015_010 Hb_002169_010 Hb_002169_010 Hb_002284_300--Hb_002169_010 Hb_010866_040 Hb_010866_040 Hb_002284_300--Hb_010866_040 Hb_002391_110 Hb_002391_110 Hb_000599_120--Hb_002391_110 Hb_000057_060 Hb_000057_060 Hb_000599_120--Hb_000057_060 Hb_000984_180 Hb_000984_180 Hb_000599_120--Hb_000984_180 Hb_000365_360 Hb_000365_360 Hb_000599_120--Hb_000365_360 Hb_000696_110 Hb_000696_110 Hb_000599_120--Hb_000696_110 Hb_127979_010 Hb_127979_010 Hb_000599_120--Hb_127979_010 Hb_003728_020 Hb_003728_020 Hb_150069_020--Hb_003728_020 Hb_002272_250 Hb_002272_250 Hb_150069_020--Hb_002272_250 Hb_005527_050 Hb_005527_050 Hb_150069_020--Hb_005527_050 Hb_076787_010 Hb_076787_010 Hb_150069_020--Hb_076787_010 Hb_003453_020 Hb_003453_020 Hb_150069_020--Hb_003453_020 Hb_002249_140 Hb_002249_140 Hb_150069_020--Hb_002249_140 Hb_153547_010 Hb_153547_010 Hb_054380_010--Hb_153547_010 Hb_001009_050 Hb_001009_050 Hb_054380_010--Hb_001009_050 Hb_001623_550 Hb_001623_550 Hb_054380_010--Hb_001623_550 Hb_117950_020 Hb_117950_020 Hb_054380_010--Hb_117950_020 Hb_000331_480 Hb_000331_480 Hb_054380_010--Hb_000331_480 Hb_004374_010 Hb_004374_010 Hb_000015_010--Hb_004374_010 Hb_000284_200 Hb_000284_200 Hb_000015_010--Hb_000284_200 Hb_002044_090 Hb_002044_090 Hb_000015_010--Hb_002044_090 Hb_000188_190 Hb_000188_190 Hb_000015_010--Hb_000188_190 Hb_000062_230 Hb_000062_230 Hb_000015_010--Hb_000062_230 Hb_160818_010 Hb_160818_010 Hb_000015_010--Hb_160818_010 Hb_029281_010 Hb_029281_010 Hb_002169_010--Hb_029281_010 Hb_011496_010 Hb_011496_010 Hb_002169_010--Hb_011496_010 Hb_002169_010--Hb_160818_010 Hb_000462_150 Hb_000462_150 Hb_002169_010--Hb_000462_150 Hb_002377_050 Hb_002377_050 Hb_002169_010--Hb_002377_050 Hb_002818_040 Hb_002818_040 Hb_002169_010--Hb_002818_040 Hb_010866_040--Hb_002169_010 Hb_004310_060 Hb_004310_060 Hb_010866_040--Hb_004310_060 Hb_010866_040--Hb_000462_150 Hb_000457_060 Hb_000457_060 Hb_010866_040--Hb_000457_060 Hb_018663_020 Hb_018663_020 Hb_010866_040--Hb_018663_020 Hb_000370_030 Hb_000370_030 Hb_010866_040--Hb_000370_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
200.005 32.8137 20.0064 7.40768 192.229 167.111
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
120.669 79.0502 84.2768 79.213 36.3342

CAGE analysis