Hb_002301_030

Information

Type -
Description -
Location Contig2301: 45379-52628
Sequence    

Annotation

kegg
ID cit:102623014
description receptor-like protein kinase HSL1-like
nr
ID XP_012092411.1
description PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
swissprot
ID Q9SGP2
description Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1
trembl
ID A0A067JNC4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21485 PE=3 SV=1
Gene Ontology
ID GO:0016021
description receptor-like protein kinase hsl1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24109: 46331-46639 , PASA_asmbl_24110: 48919-52130
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002301_030 0.0 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
2 Hb_000510_150 0.0767406098 - - PREDICTED: magnesium transporter MRS2-I-like isoform X1 [Jatropha curcas]
3 Hb_001246_130 0.0841880083 - - PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [Jatropha curcas]
4 Hb_002687_200 0.0891919787 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000027_200 0.0896930205 - - PREDICTED: uncharacterized protein LOC105642055 [Jatropha curcas]
6 Hb_000665_170 0.095112493 - - PREDICTED: probable beta-1,3-galactosyltransferase 10 [Jatropha curcas]
7 Hb_002808_020 0.0979974269 - - PREDICTED: uncharacterized protein LOC105630318 isoform X1 [Jatropha curcas]
8 Hb_015884_020 0.0995840305 - - PREDICTED: protein PIR [Jatropha curcas]
9 Hb_033642_060 0.0996349578 - - PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]
10 Hb_003777_030 0.0999660153 - - Exocyst complex component, putative [Ricinus communis]
11 Hb_002007_260 0.1000298815 - - beta-mannosidase, putative [Ricinus communis]
12 Hb_000418_020 0.1000425397 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
13 Hb_001558_040 0.1020136499 - - PREDICTED: GPI ethanolamine phosphate transferase 2 [Jatropha curcas]
14 Hb_005854_040 0.1033844979 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002639_030 0.1035276048 - - PREDICTED: prolyl endopeptidase [Jatropha curcas]
16 Hb_002849_050 0.1044676614 - - PREDICTED: probable serine/threonine-protein kinase At1g01540 [Jatropha curcas]
17 Hb_000035_220 0.1048231339 - - PREDICTED: transmembrane 9 superfamily member 8 [Jatropha curcas]
18 Hb_183086_030 0.1050402211 - - GTPase-activating protein GYP7 [Gossypium arboreum]
19 Hb_005741_040 0.107460504 - - PREDICTED: probable receptor-like protein kinase At1g49730 [Jatropha curcas]
20 Hb_000599_360 0.1084491542 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_002301_030 Hb_002301_030 Hb_000510_150 Hb_000510_150 Hb_002301_030--Hb_000510_150 Hb_001246_130 Hb_001246_130 Hb_002301_030--Hb_001246_130 Hb_002687_200 Hb_002687_200 Hb_002301_030--Hb_002687_200 Hb_000027_200 Hb_000027_200 Hb_002301_030--Hb_000027_200 Hb_000665_170 Hb_000665_170 Hb_002301_030--Hb_000665_170 Hb_002808_020 Hb_002808_020 Hb_002301_030--Hb_002808_020 Hb_000035_220 Hb_000035_220 Hb_000510_150--Hb_000035_220 Hb_000342_170 Hb_000342_170 Hb_000510_150--Hb_000342_170 Hb_000510_150--Hb_000665_170 Hb_003540_080 Hb_003540_080 Hb_000510_150--Hb_003540_080 Hb_002942_230 Hb_002942_230 Hb_000510_150--Hb_002942_230 Hb_002007_260 Hb_002007_260 Hb_001246_130--Hb_002007_260 Hb_030982_010 Hb_030982_010 Hb_001246_130--Hb_030982_010 Hb_006120_050 Hb_006120_050 Hb_001246_130--Hb_006120_050 Hb_000054_040 Hb_000054_040 Hb_001246_130--Hb_000054_040 Hb_002552_040 Hb_002552_040 Hb_001246_130--Hb_002552_040 Hb_002045_170 Hb_002045_170 Hb_001246_130--Hb_002045_170 Hb_003680_220 Hb_003680_220 Hb_002687_200--Hb_003680_220 Hb_015884_020 Hb_015884_020 Hb_002687_200--Hb_015884_020 Hb_000007_090 Hb_000007_090 Hb_002687_200--Hb_000007_090 Hb_002687_200--Hb_000027_200 Hb_002687_200--Hb_002552_040 Hb_002687_200--Hb_002942_230 Hb_005854_040 Hb_005854_040 Hb_000027_200--Hb_005854_040 Hb_000027_200--Hb_015884_020 Hb_021977_010 Hb_021977_010 Hb_000027_200--Hb_021977_010 Hb_001159_060 Hb_001159_060 Hb_000027_200--Hb_001159_060 Hb_000976_110 Hb_000976_110 Hb_000027_200--Hb_000976_110 Hb_000256_230 Hb_000256_230 Hb_000665_170--Hb_000256_230 Hb_003777_030 Hb_003777_030 Hb_000665_170--Hb_003777_030 Hb_010672_020 Hb_010672_020 Hb_000665_170--Hb_010672_020 Hb_003209_130 Hb_003209_130 Hb_000665_170--Hb_003209_130 Hb_007545_010 Hb_007545_010 Hb_000665_170--Hb_007545_010 Hb_000389_030 Hb_000389_030 Hb_000665_170--Hb_000389_030 Hb_002639_030 Hb_002639_030 Hb_002808_020--Hb_002639_030 Hb_103688_010 Hb_103688_010 Hb_002808_020--Hb_103688_010 Hb_004837_280 Hb_004837_280 Hb_002808_020--Hb_004837_280 Hb_000849_080 Hb_000849_080 Hb_002808_020--Hb_000849_080 Hb_002808_020--Hb_002687_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.62093 3.15511 5.21156 7.81495 1.34134 2.63477
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.08852 1.36246 1.39525 5.53753 5.5802

CAGE analysis