Hb_002301_260

Information

Type -
Description -
Location Contig2301: 267029-269190
Sequence    

Annotation

kegg
ID -
description -
nr
ID EYU27993.1
description hypothetical protein MIMGU_mgv1a0031591mg, partial [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID A0A022QL77
description Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a0031591mg PE=4 SV=1
Gene Ontology
ID GO:0008233
description protease-related family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24158: 267377-282160
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002301_260 0.0 - - hypothetical protein MIMGU_mgv1a0031591mg, partial [Erythranthe guttata]
2 Hb_000671_110 0.0760188182 - - hypothetical protein JCGZ_23794 [Jatropha curcas]
3 Hb_019813_010 0.0780807283 - - PREDICTED: uncharacterized protein LOC105646947 [Jatropha curcas]
4 Hb_000951_110 0.0904045907 - - heat shock protein, putative [Ricinus communis]
5 Hb_020665_030 0.0912564826 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003656_180 0.0952112451 - - PREDICTED: uncharacterized protein LOC105637927 [Jatropha curcas]
7 Hb_003847_120 0.0971964403 - - WD-repeat protein, putative [Ricinus communis]
8 Hb_058702_010 0.0976233603 - - PREDICTED: importin beta-like SAD2 isoform X2 [Jatropha curcas]
9 Hb_009151_020 0.0981679985 - - PREDICTED: DNA polymerase delta catalytic subunit [Jatropha curcas]
10 Hb_000347_570 0.0984232192 - - PREDICTED: transcription initiation factor TFIID subunit 12b isoform X1 [Jatropha curcas]
11 Hb_002960_160 0.0986382058 - - PREDICTED: vacuolar protein sorting-associated protein 35B isoform X2 [Jatropha curcas]
12 Hb_006882_020 0.1003638233 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000768_070 0.1052215491 transcription factor TF Family: SNF2 PREDICTED: TATA-binding protein-associated factor BTAF1 isoform X2 [Jatropha curcas]
14 Hb_001473_090 0.105830725 - - PREDICTED: uncharacterized protein LOC105650374 [Jatropha curcas]
15 Hb_004096_100 0.1066806355 - - PREDICTED: NADPH-dependent diflavin oxidoreductase 1 [Jatropha curcas]
16 Hb_000160_220 0.1067853014 - - PREDICTED: protein AAR2 homolog isoform X1 [Jatropha curcas]
17 Hb_001811_120 0.1074510303 - - PREDICTED: KH domain-containing protein At4g18375 isoform X1 [Jatropha curcas]
18 Hb_000866_470 0.1091071209 - - PREDICTED: uncharacterized protein LOC105643015 [Jatropha curcas]
19 Hb_001178_150 0.1098562726 - - PREDICTED: uncharacterized protein LOC105635484 [Jatropha curcas]
20 Hb_002903_080 0.1102691917 - - PREDICTED: splicing factor 3B subunit 2 [Jatropha curcas]

Gene co-expression network

sample Hb_002301_260 Hb_002301_260 Hb_000671_110 Hb_000671_110 Hb_002301_260--Hb_000671_110 Hb_019813_010 Hb_019813_010 Hb_002301_260--Hb_019813_010 Hb_000951_110 Hb_000951_110 Hb_002301_260--Hb_000951_110 Hb_020665_030 Hb_020665_030 Hb_002301_260--Hb_020665_030 Hb_003656_180 Hb_003656_180 Hb_002301_260--Hb_003656_180 Hb_003847_120 Hb_003847_120 Hb_002301_260--Hb_003847_120 Hb_004096_100 Hb_004096_100 Hb_000671_110--Hb_004096_100 Hb_000671_110--Hb_000951_110 Hb_001025_080 Hb_001025_080 Hb_000671_110--Hb_001025_080 Hb_002903_080 Hb_002903_080 Hb_000671_110--Hb_002903_080 Hb_000671_110--Hb_020665_030 Hb_000160_220 Hb_000160_220 Hb_019813_010--Hb_000160_220 Hb_002960_160 Hb_002960_160 Hb_019813_010--Hb_002960_160 Hb_046931_010 Hb_046931_010 Hb_019813_010--Hb_046931_010 Hb_000939_060 Hb_000939_060 Hb_019813_010--Hb_000939_060 Hb_019813_010--Hb_003847_120 Hb_000832_130 Hb_000832_130 Hb_000951_110--Hb_000832_130 Hb_000951_110--Hb_020665_030 Hb_002471_210 Hb_002471_210 Hb_000951_110--Hb_002471_210 Hb_007108_030 Hb_007108_030 Hb_000951_110--Hb_007108_030 Hb_009151_020 Hb_009151_020 Hb_020665_030--Hb_009151_020 Hb_000329_130 Hb_000329_130 Hb_020665_030--Hb_000329_130 Hb_000347_570 Hb_000347_570 Hb_020665_030--Hb_000347_570 Hb_000714_050 Hb_000714_050 Hb_020665_030--Hb_000714_050 Hb_020665_030--Hb_003847_120 Hb_000320_200 Hb_000320_200 Hb_020665_030--Hb_000320_200 Hb_117552_010 Hb_117552_010 Hb_003656_180--Hb_117552_010 Hb_102269_010 Hb_102269_010 Hb_003656_180--Hb_102269_010 Hb_003884_030 Hb_003884_030 Hb_003656_180--Hb_003884_030 Hb_000785_040 Hb_000785_040 Hb_003656_180--Hb_000785_040 Hb_001473_090 Hb_001473_090 Hb_003656_180--Hb_001473_090 Hb_002551_070 Hb_002551_070 Hb_003656_180--Hb_002551_070 Hb_015026_050 Hb_015026_050 Hb_003847_120--Hb_015026_050 Hb_003847_120--Hb_001473_090 Hb_006915_060 Hb_006915_060 Hb_003847_120--Hb_006915_060 Hb_000475_020 Hb_000475_020 Hb_003847_120--Hb_000475_020 Hb_000029_320 Hb_000029_320 Hb_003847_120--Hb_000029_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.24352 4.41658 2.09092 2.53852 6.08504 9.56759
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.89856 3.24456 1.84955 2.0343 3.45895

CAGE analysis