Hb_002308_060

Information

Type -
Description -
Location Contig2308: 135385-140798
Sequence    

Annotation

kegg
ID pop:POPTR_0014s06790g
description POPTRDRAFT_86546; hypothetical protein
nr
ID XP_012084311.1
description PREDICTED: cytochrome P450 704C1-like [Jatropha curcas]
swissprot
ID Q50EK3
description Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1
trembl
ID A0A067JUW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19708 PE=3 SV=1
Gene Ontology
ID GO:0004197
description cytochrome p450 704c1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24270: 135632-138699 , PASA_asmbl_24271: 138473-140521
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002308_060 0.0 - - PREDICTED: cytochrome P450 704C1-like [Jatropha curcas]
2 Hb_003992_220 0.1135672777 - - s-receptor kinase, putative [Ricinus communis]
3 Hb_000597_080 0.1195664791 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
4 Hb_001963_110 0.1196604934 - - -
5 Hb_170878_060 0.1241854569 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
6 Hb_001607_070 0.1251054427 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
7 Hb_092029_010 0.1266283172 - - Disease resistance protein RPM1, putative [Ricinus communis]
8 Hb_000264_340 0.1277302806 - - PREDICTED: callose synthase 11-like isoform X1 [Jatropha curcas]
9 Hb_001109_130 0.1280500467 - - PREDICTED: coiled-coil domain-containing protein 136 isoform X1 [Jatropha curcas]
10 Hb_000465_450 0.1328955429 - - triacylglycerol lipase, putative [Ricinus communis]
11 Hb_038833_010 0.1332526425 - - polyprotein [Ananas comosus]
12 Hb_000442_170 0.1385606573 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
13 Hb_060198_010 0.1397814821 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
14 Hb_026144_030 0.1400455809 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
15 Hb_006355_070 0.1410558185 transcription factor TF Family: bHLH Phytochrome-interacting factor, putative [Ricinus communis]
16 Hb_004307_070 0.1449516581 - - kinase, putative [Ricinus communis]
17 Hb_029866_110 0.1449924368 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 10-like [Jatropha curcas]
18 Hb_002888_050 0.1487678988 - - PREDICTED: phospholipase SGR2 isoform X1 [Jatropha curcas]
19 Hb_001778_040 0.1490156389 - - hypothetical protein VITISV_021035 [Vitis vinifera]
20 Hb_003212_010 0.1491577932 - - sucrose transporter 4 [Hevea brasiliensis]

Gene co-expression network

sample Hb_002308_060 Hb_002308_060 Hb_003992_220 Hb_003992_220 Hb_002308_060--Hb_003992_220 Hb_000597_080 Hb_000597_080 Hb_002308_060--Hb_000597_080 Hb_001963_110 Hb_001963_110 Hb_002308_060--Hb_001963_110 Hb_170878_060 Hb_170878_060 Hb_002308_060--Hb_170878_060 Hb_001607_070 Hb_001607_070 Hb_002308_060--Hb_001607_070 Hb_092029_010 Hb_092029_010 Hb_002308_060--Hb_092029_010 Hb_003992_220--Hb_170878_060 Hb_167211_010 Hb_167211_010 Hb_003992_220--Hb_167211_010 Hb_001778_040 Hb_001778_040 Hb_003992_220--Hb_001778_040 Hb_001109_130 Hb_001109_130 Hb_003992_220--Hb_001109_130 Hb_003992_220--Hb_001963_110 Hb_000917_120 Hb_000917_120 Hb_000597_080--Hb_000917_120 Hb_000597_080--Hb_001607_070 Hb_009659_040 Hb_009659_040 Hb_000597_080--Hb_009659_040 Hb_008111_010 Hb_008111_010 Hb_000597_080--Hb_008111_010 Hb_006120_030 Hb_006120_030 Hb_000597_080--Hb_006120_030 Hb_000264_340 Hb_000264_340 Hb_000597_080--Hb_000264_340 Hb_000442_170 Hb_000442_170 Hb_001963_110--Hb_000442_170 Hb_001677_230 Hb_001677_230 Hb_001963_110--Hb_001677_230 Hb_000776_020 Hb_000776_020 Hb_001963_110--Hb_000776_020 Hb_002888_060 Hb_002888_060 Hb_001963_110--Hb_002888_060 Hb_170878_060--Hb_001607_070 Hb_007676_060 Hb_007676_060 Hb_170878_060--Hb_007676_060 Hb_038833_010 Hb_038833_010 Hb_170878_060--Hb_038833_010 Hb_170878_060--Hb_000597_080 Hb_002622_010 Hb_002622_010 Hb_001607_070--Hb_002622_010 Hb_000120_880 Hb_000120_880 Hb_001607_070--Hb_000120_880 Hb_001607_070--Hb_001778_040 Hb_005305_030 Hb_005305_030 Hb_092029_010--Hb_005305_030 Hb_092029_010--Hb_000264_340 Hb_092029_010--Hb_038833_010 Hb_000465_450 Hb_000465_450 Hb_092029_010--Hb_000465_450 Hb_005306_020 Hb_005306_020 Hb_092029_010--Hb_005306_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.22693 2.57288 7.38012 0.0409922 0.0287633
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.144294 0.018922 0.2866 10.2137 13.1335

CAGE analysis