Hb_002315_070

Information

Type -
Description -
Location Contig2315: 38140-40594
Sequence    

Annotation

kegg
ID rcu:RCOM_1446010
description hypothetical protein
nr
ID XP_012067321.1
description PREDICTED: uncharacterized protein LOC105630187 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L087
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26845 PE=4 SV=1
Gene Ontology
ID GO:0005773
description bro1 domain-containing protein brox homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002315_070 0.0 - - PREDICTED: uncharacterized protein LOC105630187 [Jatropha curcas]
2 Hb_129279_020 0.1204067455 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
3 Hb_050484_010 0.1414164795 - - unnamed protein product [Vitis vinifera]
4 Hb_001269_020 0.1554762343 - - PREDICTED: beta-Amyrin Synthase 2-like [Vitis vinifera]
5 Hb_006418_010 0.1767730737 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
6 Hb_001157_150 0.1826647267 - - PREDICTED: transmembrane protein 45A-like [Jatropha curcas]
7 Hb_004109_300 0.1856027368 - - hypothetical protein POPTR_0003s21800g [Populus trichocarpa]
8 Hb_032631_010 0.1875187522 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
9 Hb_000236_360 0.1882580868 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Prunus mume]
10 Hb_181092_010 0.1895322595 - - unnamed protein product [Vitis vinifera]
11 Hb_000380_040 0.1908151299 - - bel1 homeotic protein, putative [Ricinus communis]
12 Hb_000185_060 0.1972542875 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
13 Hb_009083_080 0.1986975202 - - conserved hypothetical protein [Ricinus communis]
14 Hb_006711_010 0.19917699 - - cytoplasmic dynein light chain, putative [Ricinus communis]
15 Hb_156949_010 0.2018410464 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
16 Hb_125876_010 0.20295444 - - unnamed protein product [Vitis vinifera]
17 Hb_006501_120 0.2032034986 - - hypothetical protein JCGZ_07378 [Jatropha curcas]
18 Hb_000856_350 0.2046106044 transcription factor TF Family: WRKY WRKY transcription factor 36 [Jatropha curcas]
19 Hb_005550_070 0.2052370468 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 75 [Populus euphratica]
20 Hb_001211_020 0.2065766003 transcription factor TF Family: MYB hypothetical protein POPTR_0002s11440g [Populus trichocarpa]

Gene co-expression network

sample Hb_002315_070 Hb_002315_070 Hb_129279_020 Hb_129279_020 Hb_002315_070--Hb_129279_020 Hb_050484_010 Hb_050484_010 Hb_002315_070--Hb_050484_010 Hb_001269_020 Hb_001269_020 Hb_002315_070--Hb_001269_020 Hb_006418_010 Hb_006418_010 Hb_002315_070--Hb_006418_010 Hb_001157_150 Hb_001157_150 Hb_002315_070--Hb_001157_150 Hb_004109_300 Hb_004109_300 Hb_002315_070--Hb_004109_300 Hb_129279_020--Hb_050484_010 Hb_001454_340 Hb_001454_340 Hb_129279_020--Hb_001454_340 Hb_129279_020--Hb_001269_020 Hb_033006_040 Hb_033006_040 Hb_129279_020--Hb_033006_040 Hb_006711_010 Hb_006711_010 Hb_129279_020--Hb_006711_010 Hb_000236_360 Hb_000236_360 Hb_050484_010--Hb_000236_360 Hb_050484_010--Hb_001454_340 Hb_050484_010--Hb_004109_300 Hb_050484_010--Hb_001157_150 Hb_181092_010 Hb_181092_010 Hb_001269_020--Hb_181092_010 Hb_002677_010 Hb_002677_010 Hb_001269_020--Hb_002677_010 Hb_000185_060 Hb_000185_060 Hb_001269_020--Hb_000185_060 Hb_156949_010 Hb_156949_010 Hb_001269_020--Hb_156949_010 Hb_032582_010 Hb_032582_010 Hb_001269_020--Hb_032582_010 Hb_000856_350 Hb_000856_350 Hb_001269_020--Hb_000856_350 Hb_009083_080 Hb_009083_080 Hb_006418_010--Hb_009083_080 Hb_004656_020 Hb_004656_020 Hb_006418_010--Hb_004656_020 Hb_002019_030 Hb_002019_030 Hb_006418_010--Hb_002019_030 Hb_003253_060 Hb_003253_060 Hb_006418_010--Hb_003253_060 Hb_001376_040 Hb_001376_040 Hb_006418_010--Hb_001376_040 Hb_006418_010--Hb_000185_060 Hb_001157_150--Hb_000236_360 Hb_000380_040 Hb_000380_040 Hb_001157_150--Hb_000380_040 Hb_001157_150--Hb_009083_080 Hb_000077_470 Hb_000077_470 Hb_001157_150--Hb_000077_470 Hb_002003_020 Hb_002003_020 Hb_001157_150--Hb_002003_020 Hb_000334_250 Hb_000334_250 Hb_001157_150--Hb_000334_250 Hb_125876_010 Hb_125876_010 Hb_004109_300--Hb_125876_010 Hb_002743_030 Hb_002743_030 Hb_004109_300--Hb_002743_030 Hb_047163_010 Hb_047163_010 Hb_004109_300--Hb_047163_010 Hb_004109_300--Hb_000236_360 Hb_004109_300--Hb_156949_010 Hb_003074_070 Hb_003074_070 Hb_004109_300--Hb_003074_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.268759 0 0.0261943 0.0167177 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.029944 0 0.38348 0

CAGE analysis