Hb_002326_070

Information

Type -
Description -
Location Contig2326: 77146-80295
Sequence    

Annotation

kegg
ID rcu:RCOM_1592560
description ent-kaurene oxidase, putative (EC:1.14.13.78)
nr
ID NP_001292955.1
description ent-kaurene oxidase, chloroplastic [Jatropha curcas]
swissprot
ID Q93ZB2
description Ent-kaurene oxidase, chloroplastic OS=Arabidopsis thaliana GN=KO PE=1 SV=2
trembl
ID S4S388
description Ent-kaurene oxidase OS=Jatropha curcas GN=EKO PE=2 SV=1
Gene Ontology
ID GO:0005783
description ent-kaurene chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002326_070 0.0 - - ent-kaurene oxidase, chloroplastic [Jatropha curcas]
2 Hb_080147_080 0.1853192885 - - peroxiredoxin, putative [Ricinus communis]
3 Hb_079733_010 0.1854632965 - - -
4 Hb_181975_010 0.1871385183 - - PREDICTED: probable disease resistance protein At4g27220 [Populus euphratica]
5 Hb_005464_030 0.1925150121 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_000834_240 0.1926255622 - - hypothetical protein JCGZ_07230 [Jatropha curcas]
7 Hb_001907_100 0.1968436754 - - PREDICTED: putative disease resistance protein At3g14460 [Vitis vinifera]
8 Hb_002027_380 0.202718281 - - PREDICTED: secoisolariciresinol dehydrogenase isoform X2 [Jatropha curcas]
9 Hb_000836_370 0.2069500466 - - PREDICTED: protein REVEILLE 3-like isoform X1 [Jatropha curcas]
10 Hb_001114_230 0.207899605 - - -
11 Hb_000987_130 0.2172223803 - - -
12 Hb_005000_300 0.2206552366 transcription factor TF Family: TRAF putative regulatory protein NPR1 [Hevea brasiliensis]
13 Hb_002316_050 0.2248719796 - - conserved hypothetical protein [Ricinus communis]
14 Hb_006420_020 0.2250614596 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
15 Hb_001493_010 0.2261411048 - - triacylglycerol acidic lipase TAL4 [Ricinus communis]
16 Hb_075449_020 0.226292466 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
17 Hb_075230_010 0.2264906493 - - PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Glycine max]
18 Hb_090459_010 0.2267147901 - - hypothetical protein POPTR_0005s042901g, partial [Populus trichocarpa]
19 Hb_000175_500 0.2267917905 - - PREDICTED: uncharacterized protein At1g15400 [Populus euphratica]
20 Hb_010261_010 0.2302459447 - - PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_002326_070 Hb_002326_070 Hb_080147_080 Hb_080147_080 Hb_002326_070--Hb_080147_080 Hb_079733_010 Hb_079733_010 Hb_002326_070--Hb_079733_010 Hb_181975_010 Hb_181975_010 Hb_002326_070--Hb_181975_010 Hb_005464_030 Hb_005464_030 Hb_002326_070--Hb_005464_030 Hb_000834_240 Hb_000834_240 Hb_002326_070--Hb_000834_240 Hb_001907_100 Hb_001907_100 Hb_002326_070--Hb_001907_100 Hb_006420_020 Hb_006420_020 Hb_080147_080--Hb_006420_020 Hb_075449_020 Hb_075449_020 Hb_080147_080--Hb_075449_020 Hb_128376_010 Hb_128376_010 Hb_080147_080--Hb_128376_010 Hb_000390_220 Hb_000390_220 Hb_080147_080--Hb_000390_220 Hb_000878_100 Hb_000878_100 Hb_080147_080--Hb_000878_100 Hb_002742_080 Hb_002742_080 Hb_080147_080--Hb_002742_080 Hb_079733_010--Hb_075449_020 Hb_002027_380 Hb_002027_380 Hb_079733_010--Hb_002027_380 Hb_001493_010 Hb_001493_010 Hb_079733_010--Hb_001493_010 Hb_002316_050 Hb_002316_050 Hb_079733_010--Hb_002316_050 Hb_079733_010--Hb_000390_220 Hb_007257_050 Hb_007257_050 Hb_181975_010--Hb_007257_050 Hb_181975_010--Hb_001907_100 Hb_000003_390 Hb_000003_390 Hb_181975_010--Hb_000003_390 Hb_031089_030 Hb_031089_030 Hb_181975_010--Hb_031089_030 Hb_007978_020 Hb_007978_020 Hb_181975_010--Hb_007978_020 Hb_181975_010--Hb_001493_010 Hb_001622_010 Hb_001622_010 Hb_005464_030--Hb_001622_010 Hb_002196_010 Hb_002196_010 Hb_005464_030--Hb_002196_010 Hb_001865_040 Hb_001865_040 Hb_005464_030--Hb_001865_040 Hb_005464_030--Hb_002027_380 Hb_010531_050 Hb_010531_050 Hb_005464_030--Hb_010531_050 Hb_000836_370 Hb_000836_370 Hb_000834_240--Hb_000836_370 Hb_001114_230 Hb_001114_230 Hb_000834_240--Hb_001114_230 Hb_000152_640 Hb_000152_640 Hb_000834_240--Hb_000152_640 Hb_000179_180 Hb_000179_180 Hb_000834_240--Hb_000179_180 Hb_001950_020 Hb_001950_020 Hb_000834_240--Hb_001950_020 Hb_005054_310 Hb_005054_310 Hb_000834_240--Hb_005054_310 Hb_001907_100--Hb_002316_050 Hb_003155_020 Hb_003155_020 Hb_001907_100--Hb_003155_020 Hb_010831_020 Hb_010831_020 Hb_001907_100--Hb_010831_020 Hb_000808_070 Hb_000808_070 Hb_001907_100--Hb_000808_070 Hb_001907_100--Hb_007257_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.228363 0.53683 0.135399 0.127207 0.0932567 0.22427
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.054291 0.0213574 0 0.0425587 0

CAGE analysis