Hb_002329_020

Information

Type -
Description -
Location Contig2329: 32533-37004
Sequence    

Annotation

kegg
ID rcu:RCOM_0760190
description hypothetical protein
nr
ID XP_012089657.1
description PREDICTED: uncharacterized protein LOC105648015 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LCM3
description Enhancer of polycomb-like protein OS=Jatropha curcas GN=JCGZ_01503 PE=3 SV=1
Gene Ontology
ID GO:0032777
description enhancer of polycomb-like transcription factor isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24482: 33082-37054
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002329_020 0.0 - - PREDICTED: uncharacterized protein LOC105648015 [Jatropha curcas]
2 Hb_000061_030 0.0425085831 - - PREDICTED: pentatricopeptide repeat-containing protein At4g21065 [Jatropha curcas]
3 Hb_001279_120 0.0584210352 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Jatropha curcas]
4 Hb_002267_140 0.0632006784 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
5 Hb_002085_030 0.0696688637 - - PREDICTED: protein CHROMATIN REMODELING 4 isoform X2 [Jatropha curcas]
6 Hb_012194_030 0.0725550395 - - PREDICTED: R3H domain-containing protein 2-like isoform X1 [Jatropha curcas]
7 Hb_001754_030 0.072599571 - - PREDICTED: ubiquitin-like-specific protease ESD4 [Jatropha curcas]
8 Hb_000866_460 0.0747437216 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like [Jatropha curcas]
9 Hb_009150_020 0.0754977169 - - PREDICTED: uncharacterized protein LOC105630583 [Jatropha curcas]
10 Hb_002783_040 0.0760267057 transcription factor TF Family: IWS1 -
11 Hb_060094_020 0.0761852469 desease resistance Gene Name: ATP_bind_1 xpa-binding protein, putative [Ricinus communis]
12 Hb_002263_040 0.0772140557 - - carbon catabolite repressor protein, putative [Ricinus communis]
13 Hb_001322_130 0.0793233122 - - PREDICTED: putative glycerol-3-phosphate transporter 4 [Jatropha curcas]
14 Hb_000803_070 0.0793295689 - - PREDICTED: protein TRAUCO [Jatropha curcas]
15 Hb_000861_080 0.0801479832 - - PREDICTED: protein ELC-like [Jatropha curcas]
16 Hb_000025_730 0.0805033797 - - PREDICTED: 60S ribosomal protein L2, mitochondrial [Jatropha curcas]
17 Hb_023226_070 0.0821658428 - - conserved hypothetical protein [Ricinus communis]
18 Hb_030827_020 0.0823130024 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]
19 Hb_002253_080 0.0839987761 - - PREDICTED: phosphatidylinositol 4-kinase beta 1-like [Jatropha curcas]
20 Hb_003929_280 0.084161682 transcription factor TF Family: CAMTA calmodulin-binding transcription activator (camta), plants, putative [Ricinus communis]

Gene co-expression network

sample Hb_002329_020 Hb_002329_020 Hb_000061_030 Hb_000061_030 Hb_002329_020--Hb_000061_030 Hb_001279_120 Hb_001279_120 Hb_002329_020--Hb_001279_120 Hb_002267_140 Hb_002267_140 Hb_002329_020--Hb_002267_140 Hb_002085_030 Hb_002085_030 Hb_002329_020--Hb_002085_030 Hb_012194_030 Hb_012194_030 Hb_002329_020--Hb_012194_030 Hb_001754_030 Hb_001754_030 Hb_002329_020--Hb_001754_030 Hb_002783_040 Hb_002783_040 Hb_000061_030--Hb_002783_040 Hb_000061_030--Hb_002267_140 Hb_002263_040 Hb_002263_040 Hb_000061_030--Hb_002263_040 Hb_006275_020 Hb_006275_020 Hb_000061_030--Hb_006275_020 Hb_002843_120 Hb_002843_120 Hb_000061_030--Hb_002843_120 Hb_001545_150 Hb_001545_150 Hb_001279_120--Hb_001545_150 Hb_000099_040 Hb_000099_040 Hb_001279_120--Hb_000099_040 Hb_009150_020 Hb_009150_020 Hb_001279_120--Hb_009150_020 Hb_001279_120--Hb_002085_030 Hb_001279_120--Hb_012194_030 Hb_008253_030 Hb_008253_030 Hb_002267_140--Hb_008253_030 Hb_001767_140 Hb_001767_140 Hb_002267_140--Hb_001767_140 Hb_138596_010 Hb_138596_010 Hb_002267_140--Hb_138596_010 Hb_002276_240 Hb_002276_240 Hb_002267_140--Hb_002276_240 Hb_002253_080 Hb_002253_080 Hb_002267_140--Hb_002253_080 Hb_002267_140--Hb_002843_120 Hb_012305_030 Hb_012305_030 Hb_002085_030--Hb_012305_030 Hb_002085_030--Hb_012194_030 Hb_003866_080 Hb_003866_080 Hb_002085_030--Hb_003866_080 Hb_002085_030--Hb_001767_140 Hb_000329_370 Hb_000329_370 Hb_002085_030--Hb_000329_370 Hb_012194_030--Hb_000329_370 Hb_162275_050 Hb_162275_050 Hb_012194_030--Hb_162275_050 Hb_003835_070 Hb_003835_070 Hb_012194_030--Hb_003835_070 Hb_010712_050 Hb_010712_050 Hb_012194_030--Hb_010712_050 Hb_012779_090 Hb_012779_090 Hb_012194_030--Hb_012779_090 Hb_000809_160 Hb_000809_160 Hb_001754_030--Hb_000809_160 Hb_002477_250 Hb_002477_250 Hb_001754_030--Hb_002477_250 Hb_023226_070 Hb_023226_070 Hb_001754_030--Hb_023226_070 Hb_060094_020 Hb_060094_020 Hb_001754_030--Hb_060094_020 Hb_032264_060 Hb_032264_060 Hb_001754_030--Hb_032264_060 Hb_000723_110 Hb_000723_110 Hb_001754_030--Hb_000723_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.5566 20.5314 14.6431 9.23245 11.4726 10.5629
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.24235 8.09041 12.2973 7.88766 14.1471

CAGE analysis