Hb_002335_010

Information

Type -
Description -
Location Contig2335: 15449-19290
Sequence    

Annotation

kegg
ID pop:POPTR_0011s10430g
description hypothetical protein
nr
ID KDP23642.1
description hypothetical protein JCGZ_23475 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067JID2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23475 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002335_010 0.0 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
2 Hb_000956_100 0.0618804414 - - Cucumisin precursor, putative [Ricinus communis]
3 Hb_027892_050 0.0714354369 - - hypothetical protein PHAVU_009G226400g [Phaseolus vulgaris]
4 Hb_000041_160 0.0794932813 - - PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
5 Hb_001269_530 0.0900435209 - - ATP-binding cassette transporter, putative [Ricinus communis]
6 Hb_005074_010 0.092910351 - - PREDICTED: uncharacterized protein LOC105644456 [Jatropha curcas]
7 Hb_001913_030 0.0950327673 - - ankyrin repeat protein [Bruguiera gymnorhiza]
8 Hb_002250_140 0.1048594729 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 isoform X1 [Populus euphratica]
9 Hb_000537_090 0.1099888672 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000813_090 0.1148917844 - - hypothetical protein CARUB_v10019318mg [Capsella rubella]
11 Hb_001907_050 0.1255649623 - - Receptor like protein 6, putative [Theobroma cacao]
12 Hb_002598_020 0.1259243783 - - PREDICTED: sugar transporter ERD6-like 5 [Populus euphratica]
13 Hb_007103_020 0.1264582361 - - hypothetical protein POPTR_0007s04191g [Populus trichocarpa]
14 Hb_123078_010 0.1271968644 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
15 Hb_027474_010 0.1280849801 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
16 Hb_000270_750 0.1290565142 - - PREDICTED: RING-H2 finger protein ATL46-like [Populus euphratica]
17 Hb_001318_230 0.1295634005 - - Boron transporter, putative [Ricinus communis]
18 Hb_173107_020 0.1330175496 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
19 Hb_003835_030 0.1337395287 - - glycosyltransferase, partial [Arabidopsis thaliana]
20 Hb_003562_040 0.1338612495 - - PREDICTED: septum-promoting GTP-binding protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_002335_010 Hb_002335_010 Hb_000956_100 Hb_000956_100 Hb_002335_010--Hb_000956_100 Hb_027892_050 Hb_027892_050 Hb_002335_010--Hb_027892_050 Hb_000041_160 Hb_000041_160 Hb_002335_010--Hb_000041_160 Hb_001269_530 Hb_001269_530 Hb_002335_010--Hb_001269_530 Hb_005074_010 Hb_005074_010 Hb_002335_010--Hb_005074_010 Hb_001913_030 Hb_001913_030 Hb_002335_010--Hb_001913_030 Hb_000956_100--Hb_027892_050 Hb_000956_100--Hb_000041_160 Hb_007103_020 Hb_007103_020 Hb_000956_100--Hb_007103_020 Hb_030949_010 Hb_030949_010 Hb_000956_100--Hb_030949_010 Hb_000834_100 Hb_000834_100 Hb_000956_100--Hb_000834_100 Hb_027892_050--Hb_007103_020 Hb_027892_050--Hb_030949_010 Hb_001305_020 Hb_001305_020 Hb_027892_050--Hb_001305_020 Hb_002250_140 Hb_002250_140 Hb_027892_050--Hb_002250_140 Hb_123078_010 Hb_123078_010 Hb_000041_160--Hb_123078_010 Hb_105814_020 Hb_105814_020 Hb_000041_160--Hb_105814_020 Hb_027474_010 Hb_027474_010 Hb_000041_160--Hb_027474_010 Hb_004730_010 Hb_004730_010 Hb_000041_160--Hb_004730_010 Hb_001269_530--Hb_001913_030 Hb_000537_090 Hb_000537_090 Hb_001269_530--Hb_000537_090 Hb_000732_100 Hb_000732_100 Hb_001269_530--Hb_000732_100 Hb_000589_330 Hb_000589_330 Hb_001269_530--Hb_000589_330 Hb_173107_020 Hb_173107_020 Hb_001269_530--Hb_173107_020 Hb_003562_040 Hb_003562_040 Hb_005074_010--Hb_003562_040 Hb_005074_010--Hb_001913_030 Hb_007257_070 Hb_007257_070 Hb_005074_010--Hb_007257_070 Hb_028928_020 Hb_028928_020 Hb_005074_010--Hb_028928_020 Hb_007007_090 Hb_007007_090 Hb_005074_010--Hb_007007_090 Hb_001913_030--Hb_000537_090 Hb_001013_080 Hb_001013_080 Hb_001913_030--Hb_001013_080 Hb_001913_030--Hb_000589_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0661831 0.0135496 0.0623968 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0127297 0.0457168

CAGE analysis