Hb_002338_060

Information

Type -
Description -
Location Contig2338: 88876-90005
Sequence    

Annotation

kegg
ID gmx:100807931
description adrenodoxin-like protein, mitochondrial-like
nr
ID KHN07873.1
description 2Fe-2S ferredoxin [Glycine soja]
swissprot
ID Q8S904
description Adrenodoxin-like protein 2, mitochondrial OS=Arabidopsis thaliana GN=MFDX2 PE=2 SV=1
trembl
ID A0A0B2PJW0
description 2Fe-2S ferredoxin OS=Glycine soja GN=glysoja_032417 PE=4 SV=1
Gene Ontology
ID GO:0009055
description adrenodoxin-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24552: 86699-89109
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002338_060 0.0 - - 2Fe-2S ferredoxin [Glycine soja]
2 Hb_000265_240 0.1144085603 - - PREDICTED: uncharacterized protein LOC105643590 isoform X1 [Jatropha curcas]
3 Hb_000377_070 0.1168244547 - - PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 [Jatropha curcas]
4 Hb_007763_040 0.1361355524 - - -
5 Hb_030565_080 0.1370628752 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
6 Hb_001234_080 0.1373922745 - - PREDICTED: eyes absent homolog 2-like isoform X2 [Musa acuminata subsp. malaccensis]
7 Hb_129924_010 0.1409418295 - - PREDICTED: uncharacterized protein LOC105630505 [Jatropha curcas]
8 Hb_027760_010 0.141065145 - - PREDICTED: uncharacterized protein LOC105630460 [Jatropha curcas]
9 Hb_004735_040 0.1439586052 - - PREDICTED: GTP-binding nuclear protein Ran1A-like [Jatropha curcas]
10 Hb_000302_010 0.1449425995 - - Vesicle-associated membrane protein, putative [Ricinus communis]
11 Hb_005016_090 0.1472306631 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
12 Hb_001564_130 0.1481249786 - - PREDICTED: single-stranded DNA-binding protein, mitochondrial isoform X1 [Jatropha curcas]
13 Hb_021443_070 0.1485042326 - - PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Jatropha curcas]
14 Hb_006694_020 0.1495145832 - - PREDICTED: auxin response factor 2-like isoform X2 [Nicotiana tomentosiformis]
15 Hb_000679_300 0.1496542165 - - PREDICTED: uncharacterized protein LOC105637628 isoform X2 [Jatropha curcas]
16 Hb_000679_050 0.1503323487 - - Alba DNA/RNA-binding protein [Theobroma cacao]
17 Hb_028227_030 0.1528054903 - - PREDICTED: uncharacterized protein LOC105644817 isoform X1 [Jatropha curcas]
18 Hb_001195_280 0.1541377299 - - PREDICTED: uncharacterized protein LOC103928873 isoform X1 [Pyrus x bretschneideri]
19 Hb_000714_030 0.1548341673 - - Nucleosome assembly [Gossypium arboreum]
20 Hb_002066_070 0.1553121414 - - PREDICTED: uncharacterized protein LOC105631043 [Jatropha curcas]

Gene co-expression network

sample Hb_002338_060 Hb_002338_060 Hb_000265_240 Hb_000265_240 Hb_002338_060--Hb_000265_240 Hb_000377_070 Hb_000377_070 Hb_002338_060--Hb_000377_070 Hb_007763_040 Hb_007763_040 Hb_002338_060--Hb_007763_040 Hb_030565_080 Hb_030565_080 Hb_002338_060--Hb_030565_080 Hb_001234_080 Hb_001234_080 Hb_002338_060--Hb_001234_080 Hb_129924_010 Hb_129924_010 Hb_002338_060--Hb_129924_010 Hb_001329_290 Hb_001329_290 Hb_000265_240--Hb_001329_290 Hb_001564_130 Hb_001564_130 Hb_000265_240--Hb_001564_130 Hb_004449_170 Hb_004449_170 Hb_000265_240--Hb_004449_170 Hb_000265_240--Hb_000377_070 Hb_000265_240--Hb_030565_080 Hb_003292_040 Hb_003292_040 Hb_000265_240--Hb_003292_040 Hb_005731_050 Hb_005731_050 Hb_000377_070--Hb_005731_050 Hb_002784_080 Hb_002784_080 Hb_000377_070--Hb_002784_080 Hb_000377_070--Hb_001234_080 Hb_001635_180 Hb_001635_180 Hb_000377_070--Hb_001635_180 Hb_000670_020 Hb_000670_020 Hb_007763_040--Hb_000670_020 Hb_003683_050 Hb_003683_050 Hb_007763_040--Hb_003683_050 Hb_010368_020 Hb_010368_020 Hb_007763_040--Hb_010368_020 Hb_005016_090 Hb_005016_090 Hb_007763_040--Hb_005016_090 Hb_000714_030 Hb_000714_030 Hb_007763_040--Hb_000714_030 Hb_007763_040--Hb_001564_130 Hb_000771_080 Hb_000771_080 Hb_030565_080--Hb_000771_080 Hb_001810_030 Hb_001810_030 Hb_030565_080--Hb_001810_030 Hb_000098_190 Hb_000098_190 Hb_030565_080--Hb_000098_190 Hb_097783_020 Hb_097783_020 Hb_030565_080--Hb_097783_020 Hb_003788_050 Hb_003788_050 Hb_030565_080--Hb_003788_050 Hb_028227_020 Hb_028227_020 Hb_001234_080--Hb_028227_020 Hb_000960_060 Hb_000960_060 Hb_001234_080--Hb_000960_060 Hb_001489_060 Hb_001489_060 Hb_001234_080--Hb_001489_060 Hb_009694_010 Hb_009694_010 Hb_001234_080--Hb_009694_010 Hb_001512_060 Hb_001512_060 Hb_001234_080--Hb_001512_060 Hb_001234_080--Hb_001564_130 Hb_002259_070 Hb_002259_070 Hb_129924_010--Hb_002259_070 Hb_013405_090 Hb_013405_090 Hb_129924_010--Hb_013405_090 Hb_001538_120 Hb_001538_120 Hb_129924_010--Hb_001538_120 Hb_003528_060 Hb_003528_060 Hb_129924_010--Hb_003528_060 Hb_003683_110 Hb_003683_110 Hb_129924_010--Hb_003683_110 Hb_012753_230 Hb_012753_230 Hb_129924_010--Hb_012753_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.03067 2.34181 7.55384 5.16014 17.5993 6.37399
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.88286 18.1242 6.1514 2.2449 5.6247

CAGE analysis