Hb_002346_010

Information

Type -
Description -
Location Contig2346: 24380-30788
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002346_010 0.0 - - -
2 Hb_004787_110 0.0829021197 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000457_100 0.1045431888 - - prohibitin, putative [Ricinus communis]
4 Hb_007576_080 0.1097638383 - - PREDICTED: uncharacterized protein LOC105643972 [Jatropha curcas]
5 Hb_000676_260 0.112244522 - - PREDICTED: uncharacterized protein LOC105639070 [Jatropha curcas]
6 Hb_002585_040 0.1143177766 - - PREDICTED: cell division control protein 48 homolog B [Jatropha curcas]
7 Hb_002320_040 0.1168582324 - - PREDICTED: oligosaccharyltransferase complex subunit ostc [Jatropha curcas]
8 Hb_101733_030 0.1183404107 - - PREDICTED: uncharacterized protein At3g49055 [Jatropha curcas]
9 Hb_000487_210 0.1228117503 - - PREDICTED: uncharacterized protein LOC105641929 [Jatropha curcas]
10 Hb_007423_040 0.1237340717 - - PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Jatropha curcas]
11 Hb_014109_040 0.123789577 - - PREDICTED: probable folylpolyglutamate synthase [Jatropha curcas]
12 Hb_000175_100 0.1249828326 - - protein kinase, putative [Ricinus communis]
13 Hb_000589_120 0.1260410976 - - PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Gossypium raimondii]
14 Hb_004837_240 0.1260978959 - - PREDICTED: 40S ribosomal protein S2-4-like [Jatropha curcas]
15 Hb_027472_040 0.1284872819 - - SKP1 [Hevea brasiliensis]
16 Hb_010907_030 0.1293991587 - - -
17 Hb_002192_010 0.1297243872 - - -
18 Hb_003935_020 0.1299474988 - - PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_000331_060 0.1306762562 - - PREDICTED: 60S ribosomal protein L17-2-like isoform X2 [Jatropha curcas]
20 Hb_000402_080 0.1321588496 - - PREDICTED: pentatricopeptide repeat-containing protein At1g60770 [Jatropha curcas]

Gene co-expression network

sample Hb_002346_010 Hb_002346_010 Hb_004787_110 Hb_004787_110 Hb_002346_010--Hb_004787_110 Hb_000457_100 Hb_000457_100 Hb_002346_010--Hb_000457_100 Hb_007576_080 Hb_007576_080 Hb_002346_010--Hb_007576_080 Hb_000676_260 Hb_000676_260 Hb_002346_010--Hb_000676_260 Hb_002585_040 Hb_002585_040 Hb_002346_010--Hb_002585_040 Hb_002320_040 Hb_002320_040 Hb_002346_010--Hb_002320_040 Hb_004787_110--Hb_007576_080 Hb_034552_030 Hb_034552_030 Hb_004787_110--Hb_034552_030 Hb_004787_110--Hb_002320_040 Hb_000331_060 Hb_000331_060 Hb_004787_110--Hb_000331_060 Hb_004787_110--Hb_002585_040 Hb_027472_040 Hb_027472_040 Hb_000457_100--Hb_027472_040 Hb_001481_090 Hb_001481_090 Hb_000457_100--Hb_001481_090 Hb_000457_100--Hb_007576_080 Hb_004837_240 Hb_004837_240 Hb_000457_100--Hb_004837_240 Hb_003935_020 Hb_003935_020 Hb_000457_100--Hb_003935_020 Hb_000457_100--Hb_002585_040 Hb_014109_040 Hb_014109_040 Hb_007576_080--Hb_014109_040 Hb_003780_030 Hb_003780_030 Hb_007576_080--Hb_003780_030 Hb_000589_120 Hb_000589_120 Hb_007576_080--Hb_000589_120 Hb_007423_040 Hb_007423_040 Hb_007576_080--Hb_007423_040 Hb_002652_030 Hb_002652_030 Hb_007576_080--Hb_002652_030 Hb_007576_080--Hb_002585_040 Hb_005463_050 Hb_005463_050 Hb_000676_260--Hb_005463_050 Hb_000008_420 Hb_000008_420 Hb_000676_260--Hb_000008_420 Hb_000170_240 Hb_000170_240 Hb_000676_260--Hb_000170_240 Hb_109484_010 Hb_109484_010 Hb_000676_260--Hb_109484_010 Hb_000358_230 Hb_000358_230 Hb_000676_260--Hb_000358_230 Hb_012092_050 Hb_012092_050 Hb_000676_260--Hb_012092_050 Hb_000563_230 Hb_000563_230 Hb_002585_040--Hb_000563_230 Hb_000487_210 Hb_000487_210 Hb_002585_040--Hb_000487_210 Hb_112798_020 Hb_112798_020 Hb_002585_040--Hb_112798_020 Hb_002296_050 Hb_002296_050 Hb_002585_040--Hb_002296_050 Hb_004032_430 Hb_004032_430 Hb_002585_040--Hb_004032_430 Hb_024958_010 Hb_024958_010 Hb_002320_040--Hb_024958_010 Hb_000684_380 Hb_000684_380 Hb_002320_040--Hb_000684_380 Hb_002320_040--Hb_034552_030 Hb_002936_010 Hb_002936_010 Hb_002320_040--Hb_002936_010 Hb_002320_040--Hb_004837_240 Hb_000062_070 Hb_000062_070 Hb_002320_040--Hb_000062_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.259357 0.317095 0.265394 0.222646 0.328291 0.132151
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.221149 0.447385 0.0933578 0.357206 0.103951

CAGE analysis