Hb_002365_010

Information

Type -
Description -
Location Contig2365: 7003-12499
Sequence    

Annotation

kegg
ID bvg:104908851
description phosphatidylinositol 4-phosphate 5-kinase 9
nr
ID KDO43933.1
description hypothetical protein CISIN_1g0405342mg, partial [Citrus sinensis]
swissprot
ID Q8L850
description Phosphatidylinositol 4-phosphate 5-kinase 9 OS=Arabidopsis thaliana GN=PIP5K9 PE=1 SV=2
trembl
ID A0A067DM44
description Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0405342mg PE=4 SV=1
Gene Ontology
ID GO:0005829
description phosphatidylinositol 4-phosphate 5-kinase 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24757: 9551-10382
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002365_010 0.0 - - hypothetical protein CISIN_1g0405342mg, partial [Citrus sinensis]
2 Hb_000002_030 0.16576724 - - -
3 Hb_000003_690 0.1876585476 - - -
4 Hb_005222_010 0.201981717 - - hypothetical protein MTR_1g033950 [Medicago truncatula]
5 Hb_000316_090 0.2211442778 - - -
6 Hb_034579_010 0.224649182 - - PREDICTED: nudix hydrolase 27, chloroplastic [Jatropha curcas]
7 Hb_075642_010 0.2247072059 - - PREDICTED: uncharacterized protein LOC105647831 [Jatropha curcas]
8 Hb_032531_050 0.2279507727 - - hypothetical protein CICLE_v10003980mg [Citrus clementina]
9 Hb_096490_010 0.2331936655 - - hypothetical protein CICLE_v100210772mg, partial [Citrus clementina]
10 Hb_001981_080 0.2347223027 - - PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X4 [Musa acuminata subsp. malaccensis]
11 Hb_056531_040 0.239752229 - - PREDICTED: uncharacterized protein LOC103494239 [Cucumis melo]
12 Hb_157340_010 0.2434280482 - - hypothetical protein CISIN_1g0109951mg, partial [Citrus sinensis]
13 Hb_174005_010 0.2457659973 - - hypothetical protein EUGRSUZ_D00590 [Eucalyptus grandis]
14 Hb_001544_020 0.2462588672 - - -
15 Hb_169488_010 0.2464255102 - - PREDICTED: choline monooxygenase, chloroplastic-like [Populus euphratica]
16 Hb_003702_050 0.2535399547 - - PREDICTED: uncharacterized protein LOC105649649 [Jatropha curcas]
17 Hb_032531_060 0.2545899816 - - hypothetical protein PRUPE_ppa017035mg, partial [Prunus persica]
18 Hb_032531_040 0.2562036069 - - E3 ISG15--protein ligase HERC5 [Gossypium arboreum]
19 Hb_061581_010 0.2586448332 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
20 Hb_145827_010 0.2617147961 - - hypothetical protein POPTR_0003s13630g [Populus trichocarpa]

Gene co-expression network

sample Hb_002365_010 Hb_002365_010 Hb_000002_030 Hb_000002_030 Hb_002365_010--Hb_000002_030 Hb_000003_690 Hb_000003_690 Hb_002365_010--Hb_000003_690 Hb_005222_010 Hb_005222_010 Hb_002365_010--Hb_005222_010 Hb_000316_090 Hb_000316_090 Hb_002365_010--Hb_000316_090 Hb_034579_010 Hb_034579_010 Hb_002365_010--Hb_034579_010 Hb_075642_010 Hb_075642_010 Hb_002365_010--Hb_075642_010 Hb_032531_050 Hb_032531_050 Hb_000002_030--Hb_032531_050 Hb_000002_030--Hb_000316_090 Hb_000002_030--Hb_034579_010 Hb_101151_030 Hb_101151_030 Hb_000002_030--Hb_101151_030 Hb_001235_060 Hb_001235_060 Hb_000002_030--Hb_001235_060 Hb_000003_690--Hb_075642_010 Hb_003702_050 Hb_003702_050 Hb_000003_690--Hb_003702_050 Hb_169488_010 Hb_169488_010 Hb_000003_690--Hb_169488_010 Hb_126398_010 Hb_126398_010 Hb_000003_690--Hb_126398_010 Hb_001981_080 Hb_001981_080 Hb_000003_690--Hb_001981_080 Hb_001544_020 Hb_001544_020 Hb_005222_010--Hb_001544_020 Hb_005222_010--Hb_169488_010 Hb_005222_010--Hb_075642_010 Hb_005222_010--Hb_000003_690 Hb_003621_010 Hb_003621_010 Hb_005222_010--Hb_003621_010 Hb_000316_090--Hb_032531_050 Hb_000316_090--Hb_034579_010 Hb_145827_010 Hb_145827_010 Hb_000316_090--Hb_145827_010 Hb_000684_480 Hb_000684_480 Hb_000316_090--Hb_000684_480 Hb_001579_040 Hb_001579_040 Hb_000316_090--Hb_001579_040 Hb_032531_060 Hb_032531_060 Hb_034579_010--Hb_032531_060 Hb_005731_140 Hb_005731_140 Hb_034579_010--Hb_005731_140 Hb_124141_010 Hb_124141_010 Hb_034579_010--Hb_124141_010 Hb_005933_010 Hb_005933_010 Hb_034579_010--Hb_005933_010 Hb_168737_010 Hb_168737_010 Hb_034579_010--Hb_168737_010 Hb_000246_140 Hb_000246_140 Hb_075642_010--Hb_000246_140 Hb_075642_010--Hb_003621_010 Hb_006692_050 Hb_006692_050 Hb_075642_010--Hb_006692_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.175561 0.145115 0 0 0.132769 14.6042
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.24275 1.71062 0.360914 0.445522 0

CAGE analysis