Hb_002384_030

Information

Type -
Description -
Location Contig2384: 77055-78026
Sequence    

Annotation

kegg
ID rcu:RCOM_0812260
description hypothetical protein
nr
ID XP_002518716.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9FH92
description Protein IRX15-LIKE OS=Arabidopsis thaliana GN=IRX15-L PE=2 SV=1
trembl
ID B9RYD2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0812260 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002384_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_008731_010 0.0734281358 - - hypothetical protein POPTR_0605s00010g [Populus trichocarpa]
3 Hb_001360_020 0.082126837 - - PREDICTED: S-adenosylmethionine synthase 1 [Nelumbo nucifera]
4 Hb_027405_010 0.0885016275 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]
5 Hb_022693_090 0.0886726827 - - glycosyltransferase, putative [Ricinus communis]
6 Hb_002000_100 0.0899642061 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
7 Hb_000344_030 0.0919686857 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
8 Hb_005215_050 0.0963863965 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Jatropha curcas]
9 Hb_006154_010 0.0973699033 - - UDP-glucose 6-dehydrogenase, putative [Ricinus communis]
10 Hb_142056_010 0.100901292 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
11 Hb_002007_330 0.1011321237 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
12 Hb_003607_080 0.103179364 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
13 Hb_008021_050 0.1043457899 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_001688_030 0.1082675189 - - hypothetical protein JCGZ_10716 [Jatropha curcas]
15 Hb_004117_020 0.1085754412 - - conserved hypothetical protein [Ricinus communis]
16 Hb_133492_010 0.1103017449 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_002370_050 0.1121447526 - - hypothetical protein JCGZ_18849 [Jatropha curcas]
18 Hb_004625_020 0.1127552228 - - PREDICTED: nucleobase-ascorbate transporter 4 [Jatropha curcas]
19 Hb_000453_290 0.1135130821 - - PREDICTED: dr1-associated corepressor-like [Jatropha curcas]
20 Hb_003376_140 0.1157643499 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Jatropha curcas]

Gene co-expression network

sample Hb_002384_030 Hb_002384_030 Hb_008731_010 Hb_008731_010 Hb_002384_030--Hb_008731_010 Hb_001360_020 Hb_001360_020 Hb_002384_030--Hb_001360_020 Hb_027405_010 Hb_027405_010 Hb_002384_030--Hb_027405_010 Hb_022693_090 Hb_022693_090 Hb_002384_030--Hb_022693_090 Hb_002000_100 Hb_002000_100 Hb_002384_030--Hb_002000_100 Hb_000344_030 Hb_000344_030 Hb_002384_030--Hb_000344_030 Hb_008731_010--Hb_000344_030 Hb_002007_330 Hb_002007_330 Hb_008731_010--Hb_002007_330 Hb_007403_100 Hb_007403_100 Hb_008731_010--Hb_007403_100 Hb_008731_010--Hb_002000_100 Hb_001257_140 Hb_001257_140 Hb_008731_010--Hb_001257_140 Hb_001360_020--Hb_002000_100 Hb_142056_010 Hb_142056_010 Hb_001360_020--Hb_142056_010 Hb_001360_020--Hb_002007_330 Hb_000453_290 Hb_000453_290 Hb_001360_020--Hb_000453_290 Hb_001360_020--Hb_008731_010 Hb_000076_280 Hb_000076_280 Hb_027405_010--Hb_000076_280 Hb_001117_180 Hb_001117_180 Hb_027405_010--Hb_001117_180 Hb_027405_010--Hb_000453_290 Hb_027400_020 Hb_027400_020 Hb_027405_010--Hb_027400_020 Hb_002370_050 Hb_002370_050 Hb_027405_010--Hb_002370_050 Hb_022693_090--Hb_000453_290 Hb_009225_070 Hb_009225_070 Hb_022693_090--Hb_009225_070 Hb_022693_090--Hb_001360_020 Hb_011314_010 Hb_011314_010 Hb_022693_090--Hb_011314_010 Hb_002592_070 Hb_002592_070 Hb_022693_090--Hb_002592_070 Hb_002000_100--Hb_002007_330 Hb_002000_100--Hb_142056_010 Hb_002000_100--Hb_007403_100 Hb_000344_030--Hb_002007_330 Hb_000659_050 Hb_000659_050 Hb_000344_030--Hb_000659_050 Hb_000910_030 Hb_000910_030 Hb_000344_030--Hb_000910_030 Hb_002869_090 Hb_002869_090 Hb_000344_030--Hb_002869_090 Hb_000344_030--Hb_007403_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.177657 3.07846 2.97322 22.1668 0.0229901 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.54264 5.98566

CAGE analysis