Hb_002407_080

Information

Type -
Description -
Location Contig2407: 91519-92486
Sequence    

Annotation

kegg
ID tcc:TCM_031233
description S-locus lectin protein kinase family protein
nr
ID KDP38995.1
description hypothetical protein JCGZ_00752 [Jatropha curcas]
swissprot
ID O81832
description G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4
trembl
ID A0A067L3B7
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_00752 PE=3 SV=1
Gene Ontology
ID GO:0004674
description s-locus lectin protein kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002407_080 0.0 - - hypothetical protein JCGZ_00752 [Jatropha curcas]
2 Hb_004242_190 0.1624870201 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
3 Hb_003073_180 0.167440373 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
4 Hb_002972_020 0.1835016283 - - PREDICTED: probable ubiquitin-like-specific protease 2A isoform X1 [Jatropha curcas]
5 Hb_001258_060 0.1863998521 - - PREDICTED: phosphoenolpyruvate carboxykinase [ATP] [Jatropha curcas]
6 Hb_000009_620 0.1886202808 - - zinc finger protein, putative [Ricinus communis]
7 Hb_005273_040 0.196630026 - - -
8 Hb_008864_090 0.1986488448 - - PREDICTED: plastid division protein PDV2-like [Jatropha curcas]
9 Hb_001587_010 0.2011046451 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH25-like [Jatropha curcas]
10 Hb_006586_030 0.2045514519 - - PREDICTED: transcription factor LHW isoform X1 [Jatropha curcas]
11 Hb_000209_110 0.2063507563 - - PREDICTED: receptor-like protein kinase BRI1-like 3 [Jatropha curcas]
12 Hb_003160_020 0.2102669014 - - PREDICTED: uncharacterized protein LOC105639457 [Jatropha curcas]
13 Hb_001089_040 0.2120955581 transcription factor TF Family: bHLH DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
14 Hb_001524_090 0.2135067 - - PREDICTED: uncharacterized protein LOC105113929 [Populus euphratica]
15 Hb_001278_070 0.2140139465 - - hypothetical protein glysoja_020139 [Glycine soja]
16 Hb_001636_020 0.2252693731 - - Serine/threonine-protein kinase PBS1 [Theobroma cacao]
17 Hb_004342_030 0.2266009117 - - phosphofructokinase [Hevea brasiliensis]
18 Hb_039145_010 0.2286697746 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
19 Hb_001946_270 0.2293801399 - - hypothetical protein JCGZ_13311 [Jatropha curcas]
20 Hb_000805_320 0.2312557774 - - PREDICTED: putative hydrolase C777.06c [Jatropha curcas]

Gene co-expression network

sample Hb_002407_080 Hb_002407_080 Hb_004242_190 Hb_004242_190 Hb_002407_080--Hb_004242_190 Hb_003073_180 Hb_003073_180 Hb_002407_080--Hb_003073_180 Hb_002972_020 Hb_002972_020 Hb_002407_080--Hb_002972_020 Hb_001258_060 Hb_001258_060 Hb_002407_080--Hb_001258_060 Hb_000009_620 Hb_000009_620 Hb_002407_080--Hb_000009_620 Hb_005273_040 Hb_005273_040 Hb_002407_080--Hb_005273_040 Hb_004242_190--Hb_001258_060 Hb_028872_060 Hb_028872_060 Hb_004242_190--Hb_028872_060 Hb_000805_320 Hb_000805_320 Hb_004242_190--Hb_000805_320 Hb_006816_200 Hb_006816_200 Hb_004242_190--Hb_006816_200 Hb_003120_030 Hb_003120_030 Hb_004242_190--Hb_003120_030 Hb_003073_180--Hb_000805_320 Hb_000209_110 Hb_000209_110 Hb_003073_180--Hb_000209_110 Hb_003073_180--Hb_001258_060 Hb_080147_100 Hb_080147_100 Hb_003073_180--Hb_080147_100 Hb_006586_030 Hb_006586_030 Hb_003073_180--Hb_006586_030 Hb_011512_090 Hb_011512_090 Hb_002972_020--Hb_011512_090 Hb_001427_070 Hb_001427_070 Hb_002972_020--Hb_001427_070 Hb_001089_040 Hb_001089_040 Hb_002972_020--Hb_001089_040 Hb_001009_080 Hb_001009_080 Hb_002972_020--Hb_001009_080 Hb_001232_010 Hb_001232_010 Hb_002972_020--Hb_001232_010 Hb_000140_480 Hb_000140_480 Hb_002972_020--Hb_000140_480 Hb_014894_010 Hb_014894_010 Hb_001258_060--Hb_014894_010 Hb_008864_090 Hb_008864_090 Hb_001258_060--Hb_008864_090 Hb_001246_030 Hb_001246_030 Hb_001258_060--Hb_001246_030 Hb_001258_060--Hb_000805_320 Hb_007763_030 Hb_007763_030 Hb_001258_060--Hb_007763_030 Hb_001856_010 Hb_001856_010 Hb_000009_620--Hb_001856_010 Hb_000009_620--Hb_028872_060 Hb_000828_040 Hb_000828_040 Hb_000009_620--Hb_000828_040 Hb_004342_030 Hb_004342_030 Hb_000009_620--Hb_004342_030 Hb_114310_040 Hb_114310_040 Hb_000009_620--Hb_114310_040 Hb_001587_010 Hb_001587_010 Hb_005273_040--Hb_001587_010 Hb_002299_050 Hb_002299_050 Hb_005273_040--Hb_002299_050 Hb_001329_240 Hb_001329_240 Hb_005273_040--Hb_001329_240 Hb_001278_070 Hb_001278_070 Hb_005273_040--Hb_001278_070 Hb_005273_040--Hb_000209_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.47656 0.805589 0.379777 0.227333 1.91625 2.63281
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.18335 0.930491 1.40515 7.27654 0.415886

CAGE analysis