Hb_002411_060

Information

Type -
Description -
Location Contig2411: 50129-55420
Sequence    

Annotation

kegg
ID rcu:RCOM_0621360
description Protein regulator of cytokinesis, putative
nr
ID XP_012068728.1
description PREDICTED: 65-kDa microtubule-associated protein 5 [Jatropha curcas]
swissprot
ID Q9ZVJ3
description 65-kDa microtubule-associated protein 5 OS=Arabidopsis thaliana GN=MAP65-5 PE=1 SV=2
trembl
ID A0A067KWM9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24571 PE=4 SV=1
Gene Ontology
ID GO:0044763
description 65-kda microtubule-associated protein 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25257: 49843-54979
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002411_060 0.0 - - PREDICTED: 65-kDa microtubule-associated protein 5 [Jatropha curcas]
2 Hb_000684_120 0.1503020184 - - PREDICTED: uncharacterized protein LOC105642190 isoform X2 [Jatropha curcas]
3 Hb_004162_230 0.1609866252 - - PREDICTED: histone H2B [Jatropha curcas]
4 Hb_004449_040 0.1784437269 - - PREDICTED: uncharacterized protein C630.12 [Jatropha curcas]
5 Hb_000345_260 0.1848129159 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1 [Citrus sinensis]
6 Hb_002837_050 0.1880040339 - - hypothetical protein POPTR_0006s00550g [Populus trichocarpa]
7 Hb_004117_190 0.1957454006 - - PREDICTED: uncharacterized protein LOC105649109 [Jatropha curcas]
8 Hb_025214_120 0.1974305383 - - PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Jatropha curcas]
9 Hb_002235_380 0.1985455782 - - hypothetical protein JCGZ_19860 [Jatropha curcas]
10 Hb_005271_140 0.2007438741 transcription factor TF Family: LIM Pollen-specific protein SF3 [Morus notabilis]
11 Hb_000005_110 0.2053201206 - - histone H2B1 [Hevea brasiliensis]
12 Hb_002311_300 0.2087521981 - - PREDICTED: J protein JJJ2 [Jatropha curcas]
13 Hb_000139_490 0.2122700115 - - PREDICTED: transcription factor MUTE [Jatropha curcas]
14 Hb_001016_010 0.2132260675 - - conserved hypothetical protein [Ricinus communis]
15 Hb_010534_020 0.2173226284 - - PREDICTED: protein XRI1 isoform X1 [Jatropha curcas]
16 Hb_030627_070 0.2179499602 - - histone H4 [Zea mays]
17 Hb_001195_640 0.218034907 - - PREDICTED: uncharacterized protein LOC105633747 [Jatropha curcas]
18 Hb_004968_040 0.2190108315 - - PREDICTED: rop guanine nucleotide exchange factor 5 [Jatropha curcas]
19 Hb_002307_020 0.2195407491 - - PREDICTED: histone H1-like [Jatropha curcas]
20 Hb_084230_010 0.2202105213 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]

Gene co-expression network

sample Hb_002411_060 Hb_002411_060 Hb_000684_120 Hb_000684_120 Hb_002411_060--Hb_000684_120 Hb_004162_230 Hb_004162_230 Hb_002411_060--Hb_004162_230 Hb_004449_040 Hb_004449_040 Hb_002411_060--Hb_004449_040 Hb_000345_260 Hb_000345_260 Hb_002411_060--Hb_000345_260 Hb_002837_050 Hb_002837_050 Hb_002411_060--Hb_002837_050 Hb_004117_190 Hb_004117_190 Hb_002411_060--Hb_004117_190 Hb_030627_070 Hb_030627_070 Hb_000684_120--Hb_030627_070 Hb_000563_440 Hb_000563_440 Hb_000684_120--Hb_000563_440 Hb_005271_140 Hb_005271_140 Hb_000684_120--Hb_005271_140 Hb_001232_090 Hb_001232_090 Hb_000684_120--Hb_001232_090 Hb_124677_030 Hb_124677_030 Hb_000684_120--Hb_124677_030 Hb_000684_120--Hb_004449_040 Hb_157022_030 Hb_157022_030 Hb_004162_230--Hb_157022_030 Hb_002307_020 Hb_002307_020 Hb_004162_230--Hb_002307_020 Hb_036790_030 Hb_036790_030 Hb_004162_230--Hb_036790_030 Hb_000739_270 Hb_000739_270 Hb_004162_230--Hb_000739_270 Hb_010998_050 Hb_010998_050 Hb_004162_230--Hb_010998_050 Hb_004449_040--Hb_000563_440 Hb_001114_170 Hb_001114_170 Hb_004449_040--Hb_001114_170 Hb_004449_040--Hb_005271_140 Hb_101146_010 Hb_101146_010 Hb_004449_040--Hb_101146_010 Hb_000987_100 Hb_000987_100 Hb_000345_260--Hb_000987_100 Hb_000230_480 Hb_000230_480 Hb_000345_260--Hb_000230_480 Hb_002107_090 Hb_002107_090 Hb_000345_260--Hb_002107_090 Hb_000345_260--Hb_004117_190 Hb_001195_640 Hb_001195_640 Hb_000345_260--Hb_001195_640 Hb_001396_210 Hb_001396_210 Hb_002837_050--Hb_001396_210 Hb_003050_260 Hb_003050_260 Hb_002837_050--Hb_003050_260 Hb_002837_050--Hb_004117_190 Hb_002837_050--Hb_000684_120 Hb_002837_050--Hb_001195_640 Hb_000950_070 Hb_000950_070 Hb_002837_050--Hb_000950_070 Hb_000580_100 Hb_000580_100 Hb_004117_190--Hb_000580_100 Hb_007741_130 Hb_007741_130 Hb_004117_190--Hb_007741_130 Hb_005054_220 Hb_005054_220 Hb_004117_190--Hb_005054_220 Hb_004117_190--Hb_101146_010 Hb_003540_050 Hb_003540_050 Hb_004117_190--Hb_003540_050 Hb_001268_340 Hb_001268_340 Hb_004117_190--Hb_001268_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.163253 0.0855103 1.17988 0.710163 0.0353616 0.204653
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.401181 0.202906 0 0.242738 0.18923

CAGE analysis