Hb_002417_010

Information

Type -
Description -
Location Contig2417: 18297-21067
Sequence    

Annotation

kegg
ID rcu:RCOM_0446110
description ankyrin repeat-containing protein, putative
nr
ID XP_012066668.1
description PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
swissprot
ID Q6AWW5
description Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1
trembl
ID A0A067L1Y4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00239 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002417_010 0.0 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
2 Hb_000310_040 0.1137784577 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
3 Hb_016911_010 0.119318591 - - hypothetical protein POPTR_0010s15010g [Populus trichocarpa]
4 Hb_000861_060 0.1219368084 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
5 Hb_009062_020 0.1303355476 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis melo]
6 Hb_000586_110 0.1346437429 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
7 Hb_039075_010 0.1349718496 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
8 Hb_084812_010 0.1365094093 - - PREDICTED: putative RING-H2 finger protein ATL21B [Vitis vinifera]
9 Hb_050898_030 0.1373299773 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001136_080 0.1381012205 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
11 Hb_001025_130 0.1383935628 - - PREDICTED: uncharacterized protein LOC105640342 [Jatropha curcas]
12 Hb_000922_050 0.1391977355 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]
13 Hb_001709_120 0.1392103948 - - hypothetical protein RCOM_1313640 [Ricinus communis]
14 Hb_015292_020 0.1392818503 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
15 Hb_006586_040 0.1402460835 - - hypothetical protein POPTR_0011s11750g [Populus trichocarpa]
16 Hb_000333_140 0.1414883677 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
17 Hb_005731_040 0.142595841 - - PREDICTED: glutaredoxin-C1-like [Jatropha curcas]
18 Hb_005211_170 0.1444458086 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
19 Hb_004531_130 0.1447732431 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X2 [Jatropha curcas]
20 Hb_026218_010 0.1456061993 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002417_010 Hb_002417_010 Hb_000310_040 Hb_000310_040 Hb_002417_010--Hb_000310_040 Hb_016911_010 Hb_016911_010 Hb_002417_010--Hb_016911_010 Hb_000861_060 Hb_000861_060 Hb_002417_010--Hb_000861_060 Hb_009062_020 Hb_009062_020 Hb_002417_010--Hb_009062_020 Hb_000586_110 Hb_000586_110 Hb_002417_010--Hb_000586_110 Hb_039075_010 Hb_039075_010 Hb_002417_010--Hb_039075_010 Hb_000310_040--Hb_039075_010 Hb_000333_140 Hb_000333_140 Hb_000310_040--Hb_000333_140 Hb_005211_170 Hb_005211_170 Hb_000310_040--Hb_005211_170 Hb_030360_010 Hb_030360_010 Hb_000310_040--Hb_030360_010 Hb_004732_070 Hb_004732_070 Hb_000310_040--Hb_004732_070 Hb_000310_040--Hb_000861_060 Hb_016911_010--Hb_009062_020 Hb_001136_080 Hb_001136_080 Hb_016911_010--Hb_001136_080 Hb_016911_010--Hb_039075_010 Hb_051212_020 Hb_051212_020 Hb_016911_010--Hb_051212_020 Hb_001775_140 Hb_001775_140 Hb_016911_010--Hb_001775_140 Hb_015292_020 Hb_015292_020 Hb_016911_010--Hb_015292_020 Hb_007426_190 Hb_007426_190 Hb_000861_060--Hb_007426_190 Hb_097292_010 Hb_097292_010 Hb_000861_060--Hb_097292_010 Hb_000227_300 Hb_000227_300 Hb_000861_060--Hb_000227_300 Hb_000861_060--Hb_000586_110 Hb_005731_040 Hb_005731_040 Hb_000861_060--Hb_005731_040 Hb_009062_020--Hb_001136_080 Hb_009062_020--Hb_001775_140 Hb_000934_120 Hb_000934_120 Hb_009062_020--Hb_000934_120 Hb_009062_020--Hb_015292_020 Hb_009062_020--Hb_051212_020 Hb_026218_010 Hb_026218_010 Hb_000586_110--Hb_026218_010 Hb_000586_110--Hb_005731_040 Hb_000586_110--Hb_097292_010 Hb_001025_130 Hb_001025_130 Hb_000586_110--Hb_001025_130 Hb_002636_120 Hb_002636_120 Hb_000586_110--Hb_002636_120 Hb_039075_010--Hb_030360_010 Hb_004112_080 Hb_004112_080 Hb_039075_010--Hb_004112_080 Hb_039075_010--Hb_000333_140 Hb_011628_010 Hb_011628_010 Hb_039075_010--Hb_011628_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.04824 0.120053 0.52274 1.02034 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00924693 0.145791

CAGE analysis