Hb_002435_080

Information

Type -
Description -
Location Contig2435: 117005-117229
Sequence    

Annotation

kegg
ID rcu:RCOM_2133810
description hypothetical protein
nr
ID XP_002535768.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9TBZ9
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_2133810 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 001_D15.ab1: 116862-117362

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002435_080 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001856_060 0.1183899802 - - serine/threonine protein kinase, putative [Ricinus communis]
3 Hb_114025_010 0.1399569531 - - hypothetical protein POPTR_0008s13520g [Populus trichocarpa]
4 Hb_020902_020 0.1402765937 - - hypothetical protein JCGZ_07820 [Jatropha curcas]
5 Hb_008080_050 0.1488648141 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_001013_040 0.1592777118 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
7 Hb_099198_010 0.1593653356 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 isoform X2 [Nicotiana tomentosiformis]
8 Hb_084495_010 0.1638051423 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Eucalyptus grandis]
9 Hb_002811_330 0.1638916224 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
10 Hb_001609_080 0.1755353777 - - hypothetical protein POPTR_0017s05660g [Populus trichocarpa]
11 Hb_003121_020 0.1767714642 - - secretory peroxidase PX3 [Manihot esculenta]
12 Hb_001006_200 0.1768914801 transcription factor TF Family: G2-like conserved hypothetical protein [Ricinus communis]
13 Hb_008080_040 0.179257394 - - hypothetical protein EUGRSUZ_D00834 [Eucalyptus grandis]
14 Hb_002542_090 0.1801164948 - - Potassium transporter, putative [Ricinus communis]
15 Hb_129204_050 0.1815994619 transcription factor TF Family: MYB-related PREDICTED: myb-related protein 330-like [Prunus mume]
16 Hb_001369_320 0.1829985906 - - PREDICTED: dynein light chain, cytoplasmic-like [Jatropha curcas]
17 Hb_014113_010 0.1840522601 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
18 Hb_000291_320 0.1843726674 - - Protein MLO, putative [Ricinus communis]
19 Hb_004079_110 0.1847698537 - - PREDICTED: uncharacterized protein LOC100257802 [Vitis vinifera]
20 Hb_001775_050 0.1856048092 - - ribosome-inactivating protein cucurmosin-like [Jatropha curcas]

Gene co-expression network

sample Hb_002435_080 Hb_002435_080 Hb_001856_060 Hb_001856_060 Hb_002435_080--Hb_001856_060 Hb_114025_010 Hb_114025_010 Hb_002435_080--Hb_114025_010 Hb_020902_020 Hb_020902_020 Hb_002435_080--Hb_020902_020 Hb_008080_050 Hb_008080_050 Hb_002435_080--Hb_008080_050 Hb_001013_040 Hb_001013_040 Hb_002435_080--Hb_001013_040 Hb_099198_010 Hb_099198_010 Hb_002435_080--Hb_099198_010 Hb_001856_060--Hb_001013_040 Hb_001856_060--Hb_008080_050 Hb_001856_060--Hb_114025_010 Hb_001331_040 Hb_001331_040 Hb_001856_060--Hb_001331_040 Hb_000411_060 Hb_000411_060 Hb_001856_060--Hb_000411_060 Hb_114025_010--Hb_008080_050 Hb_001675_230 Hb_001675_230 Hb_114025_010--Hb_001675_230 Hb_006120_020 Hb_006120_020 Hb_114025_010--Hb_006120_020 Hb_000291_320 Hb_000291_320 Hb_114025_010--Hb_000291_320 Hb_001775_050 Hb_001775_050 Hb_020902_020--Hb_001775_050 Hb_001609_080 Hb_001609_080 Hb_020902_020--Hb_001609_080 Hb_008080_040 Hb_008080_040 Hb_020902_020--Hb_008080_040 Hb_005653_100 Hb_005653_100 Hb_020902_020--Hb_005653_100 Hb_000407_110 Hb_000407_110 Hb_020902_020--Hb_000407_110 Hb_001454_300 Hb_001454_300 Hb_020902_020--Hb_001454_300 Hb_008080_050--Hb_001675_230 Hb_008080_050--Hb_000411_060 Hb_002542_090 Hb_002542_090 Hb_008080_050--Hb_002542_090 Hb_008080_050--Hb_001013_040 Hb_000381_030 Hb_000381_030 Hb_001013_040--Hb_000381_030 Hb_007875_070 Hb_007875_070 Hb_001013_040--Hb_007875_070 Hb_001013_040--Hb_001331_040 Hb_012019_020 Hb_012019_020 Hb_001013_040--Hb_012019_020 Hb_002171_070 Hb_002171_070 Hb_001013_040--Hb_002171_070 Hb_084495_010 Hb_084495_010 Hb_099198_010--Hb_084495_010 Hb_003121_020 Hb_003121_020 Hb_099198_010--Hb_003121_020 Hb_014113_010 Hb_014113_010 Hb_099198_010--Hb_014113_010 Hb_010839_070 Hb_010839_070 Hb_099198_010--Hb_010839_070 Hb_099198_010--Hb_000407_110 Hb_001652_050 Hb_001652_050 Hb_099198_010--Hb_001652_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 9.34029 8.79243 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 35.1754 2.68288

CAGE analysis