Hb_002445_020

Information

Type -
Description -
Location Contig2445: 49291-51348
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002445_020 0.0 - - -
2 Hb_002764_020 0.0682296096 - - hypothetical protein JCGZ_24084 [Jatropha curcas]
3 Hb_002600_110 0.0741810774 - - hypothetical protein POPTR_0004s10540g [Populus trichocarpa]
4 Hb_000768_080 0.0790314914 - - Mlo protein [Hevea brasiliensis]
5 Hb_000920_340 0.0853567994 - - o-methyltransferase, putative [Ricinus communis]
6 Hb_042123_010 0.0866620245 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Populus euphratica]
7 Hb_007718_040 0.0869917211 - - hypothetical protein PRUPE_ppb025054mg [Prunus persica]
8 Hb_004197_030 0.0909344718 - - hypothetical protein JCGZ_16263 [Jatropha curcas]
9 Hb_000940_120 0.0931821462 - - PREDICTED: proline-rich protein 4-like isoform X2 [Pyrus x bretschneideri]
10 Hb_001951_050 0.0967113254 - - chlorophyll A/B binding protein, putative [Ricinus communis]
11 Hb_002042_220 0.0969626648 - - Kinesin heavy chain, putative [Ricinus communis]
12 Hb_001104_070 0.0973536538 - - hypothetical protein SORBIDRAFT_10g024640 [Sorghum bicolor]
13 Hb_000043_060 0.098482905 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 35 [Jatropha curcas]
14 Hb_001140_110 0.0985494355 - - hypothetical protein JCGZ_26123 [Jatropha curcas]
15 Hb_001080_290 0.0986158415 - - PSI reaction center subunit II [Citrus sinensis]
16 Hb_009004_020 0.0986619749 - - PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
17 Hb_002960_180 0.102216792 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
18 Hb_169492_010 0.1023755706 - - PREDICTED: expansin-like B1 [Jatropha curcas]
19 Hb_002675_220 0.1036040654 - - PREDICTED: probable pyridoxal biosynthesis protein PDX1.2 [Populus euphratica]
20 Hb_001775_010 0.105111514 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002445_020 Hb_002445_020 Hb_002764_020 Hb_002764_020 Hb_002445_020--Hb_002764_020 Hb_002600_110 Hb_002600_110 Hb_002445_020--Hb_002600_110 Hb_000768_080 Hb_000768_080 Hb_002445_020--Hb_000768_080 Hb_000920_340 Hb_000920_340 Hb_002445_020--Hb_000920_340 Hb_042123_010 Hb_042123_010 Hb_002445_020--Hb_042123_010 Hb_007718_040 Hb_007718_040 Hb_002445_020--Hb_007718_040 Hb_009004_020 Hb_009004_020 Hb_002764_020--Hb_009004_020 Hb_002764_020--Hb_007718_040 Hb_002764_020--Hb_000768_080 Hb_002764_020--Hb_000920_340 Hb_002764_020--Hb_002600_110 Hb_183479_030 Hb_183479_030 Hb_002600_110--Hb_183479_030 Hb_002600_110--Hb_000768_080 Hb_048694_010 Hb_048694_010 Hb_002600_110--Hb_048694_010 Hb_001775_010 Hb_001775_010 Hb_002600_110--Hb_001775_010 Hb_001080_290 Hb_001080_290 Hb_002600_110--Hb_001080_290 Hb_000768_080--Hb_001775_010 Hb_008864_050 Hb_008864_050 Hb_000768_080--Hb_008864_050 Hb_010021_040 Hb_010021_040 Hb_000768_080--Hb_010021_040 Hb_000768_080--Hb_001080_290 Hb_000920_340--Hb_007718_040 Hb_189208_080 Hb_189208_080 Hb_000920_340--Hb_189208_080 Hb_140595_030 Hb_140595_030 Hb_000920_340--Hb_140595_030 Hb_001104_070 Hb_001104_070 Hb_000920_340--Hb_001104_070 Hb_080048_030 Hb_080048_030 Hb_000920_340--Hb_080048_030 Hb_077976_010 Hb_077976_010 Hb_042123_010--Hb_077976_010 Hb_001097_110 Hb_001097_110 Hb_042123_010--Hb_001097_110 Hb_001951_050 Hb_001951_050 Hb_042123_010--Hb_001951_050 Hb_001140_110 Hb_001140_110 Hb_042123_010--Hb_001140_110 Hb_042123_010--Hb_001080_290 Hb_003058_150 Hb_003058_150 Hb_042123_010--Hb_003058_150 Hb_007718_040--Hb_001104_070 Hb_007718_040--Hb_140595_030 Hb_007718_040--Hb_189208_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.67825 4.3925 17.8679 0 0.0113486
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 79.1884

CAGE analysis