Hb_002463_050

Information

Type -
Description -
Location Contig2463: 81045-88648
Sequence    

Annotation

kegg
ID rcu:RCOM_0814080
description hypothetical protein
nr
ID XP_002518797.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RY30
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0814080 PE=4 SV=1
Gene Ontology
ID GO:0008146
description p-loop containing nucleoside triphosphate hydrolases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25607: 80905-88514 , PASA_asmbl_25609: 83167-83368 , PASA_asmbl_25611: 85829-86137
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002463_050 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002897_010 0.0966236615 - - PREDICTED: probable inactive receptor kinase At5g58300 [Jatropha curcas]
3 Hb_004678_030 0.1088156984 - - fructokinase [Manihot esculenta]
4 Hb_003687_040 0.1106716901 - - PREDICTED: uncharacterized protein LOC105632153 [Jatropha curcas]
5 Hb_000015_150 0.1162753169 - - Ubiquitin-conjugating enzyme E2 7 family protein [Populus trichocarpa]
6 Hb_000061_310 0.1228559465 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]
7 Hb_000654_050 0.1246636687 - - hypothetical protein POPTR_0005s07810g [Populus trichocarpa]
8 Hb_000069_300 0.1323636563 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
9 Hb_001862_030 0.133516322 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
10 Hb_000111_390 0.1371814729 - - PREDICTED: uncharacterized protein LOC105631262 isoform X1 [Jatropha curcas]
11 Hb_000027_170 0.1378676858 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
12 Hb_002965_160 0.1398203167 - - PREDICTED: uncharacterized protein LOC105643503 [Jatropha curcas]
13 Hb_001922_110 0.1411867544 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000165_090 0.1412043364 - - PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 2-like [Jatropha curcas]
15 Hb_000890_020 0.1413220487 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
16 Hb_000316_060 0.1449981709 - - hypothetical protein CISIN_1g017081mg [Citrus sinensis]
17 Hb_008511_040 0.1466507266 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
18 Hb_086639_050 0.1472792185 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
19 Hb_001188_050 0.1488489421 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001541_190 0.1489125999 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]

Gene co-expression network

sample Hb_002463_050 Hb_002463_050 Hb_002897_010 Hb_002897_010 Hb_002463_050--Hb_002897_010 Hb_004678_030 Hb_004678_030 Hb_002463_050--Hb_004678_030 Hb_003687_040 Hb_003687_040 Hb_002463_050--Hb_003687_040 Hb_000015_150 Hb_000015_150 Hb_002463_050--Hb_000015_150 Hb_000061_310 Hb_000061_310 Hb_002463_050--Hb_000061_310 Hb_000654_050 Hb_000654_050 Hb_002463_050--Hb_000654_050 Hb_002897_010--Hb_003687_040 Hb_000316_060 Hb_000316_060 Hb_002897_010--Hb_000316_060 Hb_000320_310 Hb_000320_310 Hb_002897_010--Hb_000320_310 Hb_008250_020 Hb_008250_020 Hb_002897_010--Hb_008250_020 Hb_002897_010--Hb_004678_030 Hb_004678_030--Hb_000654_050 Hb_000027_170 Hb_000027_170 Hb_004678_030--Hb_000027_170 Hb_001019_160 Hb_001019_160 Hb_004678_030--Hb_001019_160 Hb_004678_030--Hb_000061_310 Hb_005245_140 Hb_005245_140 Hb_004678_030--Hb_005245_140 Hb_003687_040--Hb_000061_310 Hb_003687_040--Hb_001019_160 Hb_031385_010 Hb_031385_010 Hb_003687_040--Hb_031385_010 Hb_001040_080 Hb_001040_080 Hb_003687_040--Hb_001040_080 Hb_000230_360 Hb_000230_360 Hb_003687_040--Hb_000230_360 Hb_001001_090 Hb_001001_090 Hb_000015_150--Hb_001001_090 Hb_000649_330 Hb_000649_330 Hb_000015_150--Hb_000649_330 Hb_114943_020 Hb_114943_020 Hb_000015_150--Hb_114943_020 Hb_002411_160 Hb_002411_160 Hb_000015_150--Hb_002411_160 Hb_027043_010 Hb_027043_010 Hb_000015_150--Hb_027043_010 Hb_000061_310--Hb_000230_360 Hb_000061_310--Hb_031385_010 Hb_000061_310--Hb_001019_160 Hb_001048_100 Hb_001048_100 Hb_000061_310--Hb_001048_100 Hb_002301_370 Hb_002301_370 Hb_000061_310--Hb_002301_370 Hb_012308_050 Hb_012308_050 Hb_000654_050--Hb_012308_050 Hb_000320_270 Hb_000320_270 Hb_000654_050--Hb_000320_270 Hb_000654_050--Hb_000061_310 Hb_001054_040 Hb_001054_040 Hb_000654_050--Hb_001054_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.23984 7.3781 18.4082 12.0434 0.708499 1.56014
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.440308 0.317509 0.431332 3.69461 5.16039

CAGE analysis