Hb_002477_330

Information

Type -
Description -
Location Contig2477: 225806-227110
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa005983mg
description hypothetical protein
nr
ID XP_012068941.1
description PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Jatropha curcas]
swissprot
ID Q9LTR9
description Glycylpeptide N-tetradecanoyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=1 SV=2
trembl
ID A0A067KX98
description Glycylpeptide N-tetradecanoyltransferase OS=Jatropha curcas GN=JCGZ_24741 PE=3 SV=1
Gene Ontology
ID GO:0004379
description glycylpeptide n-tetradecanoyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25816: 225696-227117
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002477_330 0.0 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Jatropha curcas]
2 Hb_010504_020 0.0625827283 - - PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera]
3 Hb_148644_010 0.0643018139 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
4 Hb_000103_090 0.0657558247 - - PREDICTED: protein RDM1 [Jatropha curcas]
5 Hb_004128_190 0.0702361547 - - PREDICTED: dirigent protein 17-like [Jatropha curcas]
6 Hb_000045_090 0.0707401505 - - PREDICTED: syntaxin-31 [Jatropha curcas]
7 Hb_143398_010 0.0719923813 - - PREDICTED: peter Pan-like protein [Jatropha curcas]
8 Hb_003125_010 0.0721367107 - - PREDICTED: uncharacterized protein LOC105640205 [Jatropha curcas]
9 Hb_002473_130 0.0722521607 - - PREDICTED: THO complex subunit 3 isoform X1 [Jatropha curcas]
10 Hb_000700_110 0.0730661157 - - Vesicle-associated membrane protein, putative [Ricinus communis]
11 Hb_000959_260 0.0755932184 - - PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas]
12 Hb_002835_080 0.0767999448 - - PREDICTED: 50S ribosomal protein L19-1, chloroplastic-like [Jatropha curcas]
13 Hb_000041_050 0.0769370219 - - PREDICTED: STE20/SPS1-related proline-alanine-rich protein kinase [Jatropha curcas]
14 Hb_010180_010 0.0772572398 - - PREDICTED: uncharacterized protein LOC105631104 [Jatropha curcas]
15 Hb_000510_130 0.0780621 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
16 Hb_000329_030 0.0781178305 - - PREDICTED: uncharacterized protein LOC105643133 isoform X1 [Jatropha curcas]
17 Hb_002759_060 0.0785228397 - - PREDICTED: protein LSM12 homolog A-like [Jatropha curcas]
18 Hb_000953_020 0.0791162864 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
19 Hb_005305_080 0.0798069419 - - PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform X1 [Jatropha curcas]
20 Hb_007416_280 0.0802468449 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002477_330 Hb_002477_330 Hb_010504_020 Hb_010504_020 Hb_002477_330--Hb_010504_020 Hb_148644_010 Hb_148644_010 Hb_002477_330--Hb_148644_010 Hb_000103_090 Hb_000103_090 Hb_002477_330--Hb_000103_090 Hb_004128_190 Hb_004128_190 Hb_002477_330--Hb_004128_190 Hb_000045_090 Hb_000045_090 Hb_002477_330--Hb_000045_090 Hb_143398_010 Hb_143398_010 Hb_002477_330--Hb_143398_010 Hb_005305_080 Hb_005305_080 Hb_010504_020--Hb_005305_080 Hb_000510_130 Hb_000510_130 Hb_010504_020--Hb_000510_130 Hb_020956_020 Hb_020956_020 Hb_010504_020--Hb_020956_020 Hb_159809_020 Hb_159809_020 Hb_010504_020--Hb_159809_020 Hb_000959_260 Hb_000959_260 Hb_010504_020--Hb_000959_260 Hb_002835_080 Hb_002835_080 Hb_148644_010--Hb_002835_080 Hb_000700_110 Hb_000700_110 Hb_148644_010--Hb_000700_110 Hb_004032_150 Hb_004032_150 Hb_148644_010--Hb_004032_150 Hb_000035_320 Hb_000035_320 Hb_148644_010--Hb_000035_320 Hb_003195_070 Hb_003195_070 Hb_148644_010--Hb_003195_070 Hb_002890_140 Hb_002890_140 Hb_000103_090--Hb_002890_140 Hb_033834_040 Hb_033834_040 Hb_000103_090--Hb_033834_040 Hb_032717_080 Hb_032717_080 Hb_000103_090--Hb_032717_080 Hb_000103_090--Hb_004128_190 Hb_000529_190 Hb_000529_190 Hb_000103_090--Hb_000529_190 Hb_002078_150 Hb_002078_150 Hb_004128_190--Hb_002078_150 Hb_003847_080 Hb_003847_080 Hb_004128_190--Hb_003847_080 Hb_000245_130 Hb_000245_130 Hb_004128_190--Hb_000245_130 Hb_012305_050 Hb_012305_050 Hb_004128_190--Hb_012305_050 Hb_000024_080 Hb_000024_080 Hb_004128_190--Hb_000024_080 Hb_002774_060 Hb_002774_060 Hb_000045_090--Hb_002774_060 Hb_009557_070 Hb_009557_070 Hb_000045_090--Hb_009557_070 Hb_000329_030 Hb_000329_030 Hb_000045_090--Hb_000329_030 Hb_004545_060 Hb_004545_060 Hb_000045_090--Hb_004545_060 Hb_000045_090--Hb_143398_010 Hb_005686_060 Hb_005686_060 Hb_000045_090--Hb_005686_060 Hb_002271_020 Hb_002271_020 Hb_143398_010--Hb_002271_020 Hb_010180_010 Hb_010180_010 Hb_143398_010--Hb_010180_010 Hb_143398_010--Hb_009557_070 Hb_002473_130 Hb_002473_130 Hb_143398_010--Hb_002473_130 Hb_143398_010--Hb_000329_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.9829 5.70544 4.29973 10.2967 8.00116 18.3436
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.4897 16.1498 13.3829 9.17563 6.00563

CAGE analysis