Hb_002486_050

Information

Type -
Description -
Location Contig2486: 38448-44310
Sequence    

Annotation

kegg
ID rcu:RCOM_0687270
description Multiple inositol polyphosphate phosphatase 1 precursor, putative (EC:3.1.3.62)
nr
ID XP_002520778.1
description Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
swissprot
ID Q54ND5
description Multiple inositol polyphosphate phosphatase 1 OS=Dictyostelium discoideum GN=mipp1 PE=1 SV=1
trembl
ID B9S459
description Multiple inositol polyphosphate phosphatase 1, putative OS=Ricinus communis GN=RCOM_0687270 PE=4 SV=1
Gene Ontology
ID GO:0005774
description multiple inositol polyphosphate phosphatase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25874: 38370-44279 , PASA_asmbl_25875: 38370-42688
cDNA
(Sanger)
(ID:Location)		 019_A06.ab1: 38392-39532 , 021_A17.ab1: 38370-39532 , 039_D23.ab1: 42398-44279

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002486_050 0.0 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
2 Hb_003209_130 0.0604020813 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
3 Hb_000256_230 0.0708524653 - - PREDICTED: uncharacterized protein LOC105637594 [Jatropha curcas]
4 Hb_005062_110 0.0727896534 - - PREDICTED: transmembrane 9 superfamily member 1 [Jatropha curcas]
5 Hb_000622_110 0.075044373 - - cmp-sialic acid transporter, putative [Ricinus communis]
6 Hb_000665_170 0.0786043099 - - PREDICTED: probable beta-1,3-galactosyltransferase 10 [Jatropha curcas]
7 Hb_000085_260 0.0809992362 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
8 Hb_012194_060 0.0822288547 - - PREDICTED: uncharacterized protein LOC105636108 [Jatropha curcas]
9 Hb_010042_030 0.0866566282 - - PREDICTED: UDP-N-acetylglucosamine diphosphorylase 1 [Jatropha curcas]
10 Hb_003777_030 0.0873500303 - - Exocyst complex component, putative [Ricinus communis]
11 Hb_007286_020 0.0879164009 - - hypothetical protein L484_010675 [Morus notabilis]
12 Hb_004126_040 0.0893151176 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001250_050 0.0913004171 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
14 Hb_000389_030 0.0925596503 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
15 Hb_005535_080 0.0925929336 - - hypothetical protein CICLE_v10012766mg [Citrus clementina]
16 Hb_005977_100 0.0955723953 - - PREDICTED: tetraspanin-18 [Jatropha curcas]
17 Hb_000926_340 0.0959178028 - - PREDICTED: EH domain-containing protein 1 isoform X1 [Jatropha curcas]
18 Hb_001677_200 0.0982190553 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000035_220 0.0990944288 - - PREDICTED: transmembrane 9 superfamily member 8 [Jatropha curcas]
20 Hb_001159_030 0.0999147305 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]

Gene co-expression network

sample Hb_002486_050 Hb_002486_050 Hb_003209_130 Hb_003209_130 Hb_002486_050--Hb_003209_130 Hb_000256_230 Hb_000256_230 Hb_002486_050--Hb_000256_230 Hb_005062_110 Hb_005062_110 Hb_002486_050--Hb_005062_110 Hb_000622_110 Hb_000622_110 Hb_002486_050--Hb_000622_110 Hb_000665_170 Hb_000665_170 Hb_002486_050--Hb_000665_170 Hb_000085_260 Hb_000085_260 Hb_002486_050--Hb_000085_260 Hb_003209_130--Hb_000256_230 Hb_003209_130--Hb_000665_170 Hb_005535_080 Hb_005535_080 Hb_003209_130--Hb_005535_080 Hb_003209_130--Hb_000622_110 Hb_004126_040 Hb_004126_040 Hb_003209_130--Hb_004126_040 Hb_000256_230--Hb_000665_170 Hb_000389_030 Hb_000389_030 Hb_000256_230--Hb_000389_030 Hb_000256_230--Hb_004126_040 Hb_000256_230--Hb_000622_110 Hb_005062_110--Hb_000085_260 Hb_010042_030 Hb_010042_030 Hb_005062_110--Hb_010042_030 Hb_001159_030 Hb_001159_030 Hb_005062_110--Hb_001159_030 Hb_000503_020 Hb_000503_020 Hb_005062_110--Hb_000503_020 Hb_005062_110--Hb_000622_110 Hb_000926_340 Hb_000926_340 Hb_000622_110--Hb_000926_340 Hb_086639_080 Hb_086639_080 Hb_000622_110--Hb_086639_080 Hb_003777_030 Hb_003777_030 Hb_000665_170--Hb_003777_030 Hb_010672_020 Hb_010672_020 Hb_000665_170--Hb_010672_020 Hb_007545_010 Hb_007545_010 Hb_000665_170--Hb_007545_010 Hb_000665_170--Hb_000389_030 Hb_000085_260--Hb_001159_030 Hb_000085_260--Hb_010042_030 Hb_000098_050 Hb_000098_050 Hb_000085_260--Hb_000098_050 Hb_000085_260--Hb_000503_020 Hb_000679_100 Hb_000679_100 Hb_000085_260--Hb_000679_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.16207 10.1385 13.6325 28.2366 6.0292 9.40202
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.58013 5.21588 5.88886 10.0267 10.2029

CAGE analysis