Hb_002490_010

Information

Type -
Description -
Location Contig2490: 89-1745
Sequence    

Annotation

kegg
ID rcu:RCOM_1726160
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012077997.1
description PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
swissprot
ID Q56ZZ7
description Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2
trembl
ID A0A067KL20
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13001 PE=3 SV=1
Gene Ontology
ID GO:0005215
description plastidic glucose transporter 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25896: 333-1751
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002490_010 0.0 - - PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
2 Hb_000028_600 0.112004263 - - glutaredoxin-1, grx1, putative [Ricinus communis]
3 Hb_003988_050 0.1265687469 - - PREDICTED: zinc finger protein-like 1 homolog [Jatropha curcas]
4 Hb_002150_040 0.1276668176 - - PREDICTED: CMP-sialic acid transporter 1 isoform X3 [Jatropha curcas]
5 Hb_010810_010 0.1334834213 - - PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
6 Hb_000136_100 0.1336760677 - - PREDICTED: syntaxin-61 [Jatropha curcas]
7 Hb_001104_100 0.1339093658 - - RecName: Full=Enolase 2; AltName: Full=2-phospho-D-glycerate hydro-lyase 2; AltName: Full=2-phosphoglycerate dehydratase 2; AltName: Allergen=Hev b 9 [Hevea brasiliensis]
8 Hb_000331_370 0.1352098464 - - Glyceraldehyde-3-phosphate dehydrogenase-2C cytosolic [Gossypium arboreum]
9 Hb_002660_150 0.1376269736 - - PREDICTED: uncharacterized protein LOC105642207 isoform X1 [Jatropha curcas]
10 Hb_011930_150 0.138567524 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
11 Hb_135757_020 0.1386528506 - - hypothetical protein AMTR_s00420p00013340 [Amborella trichopoda]
12 Hb_000115_150 0.1393374623 - - PREDICTED: IST1 homolog [Jatropha curcas]
13 Hb_004525_040 0.1432167751 - - PREDICTED: sugar transporter ERD6-like 6 [Jatropha curcas]
14 Hb_010407_140 0.1432796304 - - PREDICTED: malate dehydrogenase [Jatropha curcas]
15 Hb_007894_010 0.1437582845 - - PREDICTED: uncharacterized protein LOC105632963 [Jatropha curcas]
16 Hb_000066_030 0.1438048021 - - PREDICTED: uncharacterized protein LOC105643898 isoform X2 [Jatropha curcas]
17 Hb_000915_240 0.144523432 - - catalytic, putative [Ricinus communis]
18 Hb_001051_070 0.1457491702 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
19 Hb_000258_240 0.1461994169 - - sur2 hydroxylase/desaturase, putative [Ricinus communis]
20 Hb_003998_040 0.1465061226 - - organic anion transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_002490_010 Hb_002490_010 Hb_000028_600 Hb_000028_600 Hb_002490_010--Hb_000028_600 Hb_003988_050 Hb_003988_050 Hb_002490_010--Hb_003988_050 Hb_002150_040 Hb_002150_040 Hb_002490_010--Hb_002150_040 Hb_010810_010 Hb_010810_010 Hb_002490_010--Hb_010810_010 Hb_000136_100 Hb_000136_100 Hb_002490_010--Hb_000136_100 Hb_001104_100 Hb_001104_100 Hb_002490_010--Hb_001104_100 Hb_000028_600--Hb_003988_050 Hb_000331_370 Hb_000331_370 Hb_000028_600--Hb_000331_370 Hb_000115_150 Hb_000115_150 Hb_000028_600--Hb_000115_150 Hb_000429_050 Hb_000429_050 Hb_000028_600--Hb_000429_050 Hb_000028_600--Hb_002150_040 Hb_003988_050--Hb_000115_150 Hb_000165_080 Hb_000165_080 Hb_003988_050--Hb_000165_080 Hb_002902_130 Hb_002902_130 Hb_003988_050--Hb_002902_130 Hb_001633_080 Hb_001633_080 Hb_003988_050--Hb_001633_080 Hb_000258_240 Hb_000258_240 Hb_003988_050--Hb_000258_240 Hb_000025_190 Hb_000025_190 Hb_003988_050--Hb_000025_190 Hb_000159_090 Hb_000159_090 Hb_002150_040--Hb_000159_090 Hb_000140_280 Hb_000140_280 Hb_002150_040--Hb_000140_280 Hb_005218_020 Hb_005218_020 Hb_002150_040--Hb_005218_020 Hb_000069_210 Hb_000069_210 Hb_002150_040--Hb_000069_210 Hb_086085_020 Hb_086085_020 Hb_002150_040--Hb_086085_020 Hb_002150_040--Hb_000136_100 Hb_052805_010 Hb_052805_010 Hb_010810_010--Hb_052805_010 Hb_011214_160 Hb_011214_160 Hb_010810_010--Hb_011214_160 Hb_007894_010 Hb_007894_010 Hb_010810_010--Hb_007894_010 Hb_010407_140 Hb_010407_140 Hb_010810_010--Hb_010407_140 Hb_000139_530 Hb_000139_530 Hb_010810_010--Hb_000139_530 Hb_004223_050 Hb_004223_050 Hb_010810_010--Hb_004223_050 Hb_066842_010 Hb_066842_010 Hb_000136_100--Hb_066842_010 Hb_000136_100--Hb_007894_010 Hb_000060_050 Hb_000060_050 Hb_000136_100--Hb_000060_050 Hb_000136_100--Hb_000258_240 Hb_062537_010 Hb_062537_010 Hb_000136_100--Hb_062537_010 Hb_001104_100--Hb_000115_150 Hb_001085_240 Hb_001085_240 Hb_001104_100--Hb_001085_240 Hb_002675_140 Hb_002675_140 Hb_001104_100--Hb_002675_140 Hb_001104_230 Hb_001104_230 Hb_001104_100--Hb_001104_230 Hb_000094_210 Hb_000094_210 Hb_001104_100--Hb_000094_210 Hb_002093_060 Hb_002093_060 Hb_001104_100--Hb_002093_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.25377 4.18957 8.65642 27.5926 6.80782 10.4327
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.8052 4.37522 8.35296 14.0478 5.28367

CAGE analysis