Hb_002493_020

Information

Type -
Description -
Location Contig2493: 6671-11227
Sequence    

Annotation

kegg
ID rcu:RCOM_0611480
description hypothetical protein
nr
ID XP_012081849.1
description PREDICTED: uncharacterized protein At4g26450 isoform X3 [Jatropha curcas]
swissprot
ID P0CB21
description Uncharacterized protein At4g26450 OS=Arabidopsis thaliana GN=At4g26450 PE=4 SV=1
trembl
ID A0A067K366
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19221 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25910: 4892-11148
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002493_020 0.0 - - PREDICTED: uncharacterized protein At4g26450 isoform X3 [Jatropha curcas]
2 Hb_001496_070 0.069227036 - - PREDICTED: bromodomain-containing protein 3 [Jatropha curcas]
3 Hb_005679_050 0.0715975393 - - ABC transporter family protein [Hevea brasiliensis]
4 Hb_004102_140 0.0726840089 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004228_010 0.0741046518 - - PREDICTED: BEACH domain-containing protein lvsA [Jatropha curcas]
6 Hb_172632_080 0.077649845 - - PREDICTED: uncharacterized protein LOC105141138 isoform X1 [Populus euphratica]
7 Hb_004306_080 0.0783263477 - - PREDICTED: B-cell receptor-associated protein 31 [Jatropha curcas]
8 Hb_003966_030 0.079727971 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform X7 [Jatropha curcas]
9 Hb_000785_040 0.0798691374 - - PREDICTED: uncharacterized protein LOC105628919 [Jatropha curcas]
10 Hb_003362_070 0.0808094494 - - PREDICTED: methyltransferase-like protein 13 [Jatropha curcas]
11 Hb_007062_020 0.081109946 - - gcn4-complementing protein, putative [Ricinus communis]
12 Hb_006660_010 0.0826959119 - - PREDICTED: exocyst complex component EXO84C isoform X1 [Jatropha curcas]
13 Hb_001199_100 0.0843879888 - - PREDICTED: uncharacterized protein LOC105639813 [Jatropha curcas]
14 Hb_001329_140 0.0845076661 - - PREDICTED: zinc finger protein 598 [Jatropha curcas]
15 Hb_000457_260 0.0852590618 - - PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like isoform X1 [Jatropha curcas]
16 Hb_002974_060 0.0856661092 - - PREDICTED: transcription initiation factor TFIID subunit 15b isoform X2 [Jatropha curcas]
17 Hb_000362_150 0.0857238479 - - PREDICTED: homogentisate 1,2-dioxygenase [Jatropha curcas]
18 Hb_010417_050 0.0864049779 - - PREDICTED: uncharacterized protein LOC105645746 [Jatropha curcas]
19 Hb_001700_040 0.0866841062 - - PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1 [Jatropha curcas]
20 Hb_000025_110 0.0873816287 - - hypothetical protein JCGZ_22722 [Jatropha curcas]

Gene co-expression network

sample Hb_002493_020 Hb_002493_020 Hb_001496_070 Hb_001496_070 Hb_002493_020--Hb_001496_070 Hb_005679_050 Hb_005679_050 Hb_002493_020--Hb_005679_050 Hb_004102_140 Hb_004102_140 Hb_002493_020--Hb_004102_140 Hb_004228_010 Hb_004228_010 Hb_002493_020--Hb_004228_010 Hb_172632_080 Hb_172632_080 Hb_002493_020--Hb_172632_080 Hb_004306_080 Hb_004306_080 Hb_002493_020--Hb_004306_080 Hb_005901_020 Hb_005901_020 Hb_001496_070--Hb_005901_020 Hb_001449_040 Hb_001449_040 Hb_001496_070--Hb_001449_040 Hb_000362_150 Hb_000362_150 Hb_001496_070--Hb_000362_150 Hb_000983_150 Hb_000983_150 Hb_001496_070--Hb_000983_150 Hb_002974_060 Hb_002974_060 Hb_001496_070--Hb_002974_060 Hb_001700_040 Hb_001700_040 Hb_005679_050--Hb_001700_040 Hb_001617_060 Hb_001617_060 Hb_005679_050--Hb_001617_060 Hb_003966_030 Hb_003966_030 Hb_005679_050--Hb_003966_030 Hb_067345_010 Hb_067345_010 Hb_005679_050--Hb_067345_010 Hb_001691_120 Hb_001691_120 Hb_005679_050--Hb_001691_120 Hb_004102_140--Hb_003966_030 Hb_001488_410 Hb_001488_410 Hb_004102_140--Hb_001488_410 Hb_004102_140--Hb_001617_060 Hb_003362_070 Hb_003362_070 Hb_004102_140--Hb_003362_070 Hb_000820_170 Hb_000820_170 Hb_004102_140--Hb_000820_170 Hb_004096_100 Hb_004096_100 Hb_004102_140--Hb_004096_100 Hb_004228_010--Hb_004306_080 Hb_000796_040 Hb_000796_040 Hb_004228_010--Hb_000796_040 Hb_014267_010 Hb_014267_010 Hb_004228_010--Hb_014267_010 Hb_001472_090 Hb_001472_090 Hb_004228_010--Hb_001472_090 Hb_010417_050 Hb_010417_050 Hb_004228_010--Hb_010417_050 Hb_009218_010 Hb_009218_010 Hb_172632_080--Hb_009218_010 Hb_000072_220 Hb_000072_220 Hb_172632_080--Hb_000072_220 Hb_001199_100 Hb_001199_100 Hb_172632_080--Hb_001199_100 Hb_009548_020 Hb_009548_020 Hb_172632_080--Hb_009548_020 Hb_000457_260 Hb_000457_260 Hb_172632_080--Hb_000457_260 Hb_188063_020 Hb_188063_020 Hb_172632_080--Hb_188063_020 Hb_000785_040 Hb_000785_040 Hb_004306_080--Hb_000785_040 Hb_000116_500 Hb_000116_500 Hb_004306_080--Hb_000116_500 Hb_004306_080--Hb_004102_140 Hb_007062_020 Hb_007062_020 Hb_004306_080--Hb_007062_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
36.9203 24.2896 13.6283 27.3872 33.6964 62.0969
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
20.3102 17.2864 31.9352 26.0679 33.6801

CAGE analysis