Hb_002495_040

Information

Type -
Description -
Location Contig2495: 47496-54265
Sequence    

Annotation

kegg
ID vvi:100265910
description chaperone protein dnaJ 6
nr
ID XP_012073018.1
description PREDICTED: chaperone protein dnaJ 6 isoform X1 [Jatropha curcas]
swissprot
ID Q9FL54
description Chaperone protein dnaJ 6 OS=Arabidopsis thaliana GN=ATJ6 PE=2 SV=1
trembl
ID A0A067KYL4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06809 PE=4 SV=1
Gene Ontology
ID GO:0000166
description chaperone protein dnaj 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25928: 47554-54339
cDNA
(Sanger)
(ID:Location)		 038_A17.ab1: 48492-54339

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002495_040 0.0 - - PREDICTED: chaperone protein dnaJ 6 isoform X1 [Jatropha curcas]
2 Hb_000465_430 0.0557943193 - - PREDICTED: uncharacterized protein LOC105632325 [Jatropha curcas]
3 Hb_003030_070 0.0601754296 - - PREDICTED: ELMO domain-containing protein A isoform X1 [Jatropha curcas]
4 Hb_001369_180 0.0636903019 - - PREDICTED: protein RFT1 homolog isoform X1 [Jatropha curcas]
5 Hb_012092_010 0.0657882394 - - PREDICTED: uncharacterized protein LOC105635929 [Jatropha curcas]
6 Hb_000092_100 0.0672316572 - - PREDICTED: protein EMSY-LIKE 1 [Jatropha curcas]
7 Hb_001936_080 0.0674111276 - - PREDICTED: RNA-binding protein 48-like [Jatropha curcas]
8 Hb_005618_160 0.0731570895 - - PREDICTED: putative proline--tRNA ligase C19C7.06 [Jatropha curcas]
9 Hb_007218_080 0.0746115708 - - PREDICTED: uncharacterized protein LOC105631523 [Jatropha curcas]
10 Hb_007594_130 0.0758712669 - - PREDICTED: lysophospholipid acyltransferase LPEAT2 isoform X1 [Jatropha curcas]
11 Hb_003688_130 0.0776760567 - - phosphoserine phosphatase, putative [Ricinus communis]
12 Hb_070739_010 0.0803442 - - PREDICTED: probable aminotransferase ACS12 isoform X2 [Jatropha curcas]
13 Hb_005016_170 0.0809694531 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000645_050 0.0818904735 - - peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Populus trichocarpa]
15 Hb_027043_020 0.0818970571 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004310_130 0.0822610358 - - PREDICTED: uncharacterized protein LOC105643225 [Jatropha curcas]
17 Hb_150360_030 0.0823247334 - - PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like [Jatropha curcas]
18 Hb_002391_300 0.0826872005 - - hypothetical protein PHAVU_002G104100g [Phaseolus vulgaris]
19 Hb_000457_110 0.082699913 - - Mitochondrial ribosomal protein L37 isoform 1 [Theobroma cacao]
20 Hb_012008_020 0.0835094398 - - PREDICTED: uncharacterized protein LOC104233229 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_002495_040 Hb_002495_040 Hb_000465_430 Hb_000465_430 Hb_002495_040--Hb_000465_430 Hb_003030_070 Hb_003030_070 Hb_002495_040--Hb_003030_070 Hb_001369_180 Hb_001369_180 Hb_002495_040--Hb_001369_180 Hb_012092_010 Hb_012092_010 Hb_002495_040--Hb_012092_010 Hb_000092_100 Hb_000092_100 Hb_002495_040--Hb_000092_100 Hb_001936_080 Hb_001936_080 Hb_002495_040--Hb_001936_080 Hb_000465_430--Hb_012092_010 Hb_003502_080 Hb_003502_080 Hb_000465_430--Hb_003502_080 Hb_033843_010 Hb_033843_010 Hb_000465_430--Hb_033843_010 Hb_005016_170 Hb_005016_170 Hb_000465_430--Hb_005016_170 Hb_000465_430--Hb_000092_100 Hb_003030_070--Hb_001369_180 Hb_003665_060 Hb_003665_060 Hb_003030_070--Hb_003665_060 Hb_000230_560 Hb_000230_560 Hb_003030_070--Hb_000230_560 Hb_007317_110 Hb_007317_110 Hb_003030_070--Hb_007317_110 Hb_002391_300 Hb_002391_300 Hb_003030_070--Hb_002391_300 Hb_007218_080 Hb_007218_080 Hb_001369_180--Hb_007218_080 Hb_001369_180--Hb_000230_560 Hb_007336_020 Hb_007336_020 Hb_001369_180--Hb_007336_020 Hb_004310_130 Hb_004310_130 Hb_001369_180--Hb_004310_130 Hb_012092_010--Hb_002391_300 Hb_012092_010--Hb_003030_070 Hb_012092_010--Hb_001936_080 Hb_001195_760 Hb_001195_760 Hb_012092_010--Hb_001195_760 Hb_001635_170 Hb_001635_170 Hb_000092_100--Hb_001635_170 Hb_000092_100--Hb_001936_080 Hb_096563_010 Hb_096563_010 Hb_000092_100--Hb_096563_010 Hb_000092_100--Hb_003030_070 Hb_003001_120 Hb_003001_120 Hb_001936_080--Hb_003001_120 Hb_028227_020 Hb_028227_020 Hb_001936_080--Hb_028227_020 Hb_009557_070 Hb_009557_070 Hb_001936_080--Hb_009557_070 Hb_001936_080--Hb_000465_430
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
42.4796 17.7093 23.8007 24.92 42.4107 54.8407
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
44.0629 39.0933 19.0839 14.2842 17.3722

CAGE analysis