Hb_002495_070

Information

Type -
Description -
Location Contig2495: 86533-86889
Sequence    

Annotation

kegg
ID rcu:RCOM_0092370
description hypothetical protein
nr
ID XP_012073026.1
description PREDICTED: uncharacterized protein LOC105634731 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZT1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06813 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002495_070 0.0 - - PREDICTED: uncharacterized protein LOC105634731 [Jatropha curcas]
2 Hb_004722_060 0.074004928 - - PREDICTED: protein CLP1 homolog [Jatropha curcas]
3 Hb_000621_080 0.0761722122 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000768_050 0.0769802771 - - hypothetical protein RCOM_0845740 [Ricinus communis]
5 Hb_005489_130 0.0846431983 - - calmodulin, putative [Ricinus communis]
6 Hb_002150_080 0.0858619928 - - ubiquitin-conjugating enzyme E2, putative [Ricinus communis]
7 Hb_010449_020 0.0872587844 - - PREDICTED: rRNA-processing protein UTP23 homolog [Jatropha curcas]
8 Hb_086639_070 0.0896989051 transcription factor TF Family: bHLH PREDICTED: transcription factor BIM2 [Jatropha curcas]
9 Hb_003752_080 0.0902345536 - - PREDICTED: ubiquitin-like-conjugating enzyme ATG10 isoform X1 [Jatropha curcas]
10 Hb_000000_160 0.0926666796 - - PREDICTED: membrin-11 [Jatropha curcas]
11 Hb_007919_060 0.0927414125 - - PREDICTED: UPF0047 protein C4A8.02c [Jatropha curcas]
12 Hb_005535_050 0.0939321102 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]
13 Hb_004920_040 0.0946195767 - - PREDICTED: probable dimethyladenosine transferase [Jatropha curcas]
14 Hb_026198_050 0.0949716359 - - PREDICTED: subtilisin-like protease SBT3.3 [Jatropha curcas]
15 Hb_002762_060 0.0953828939 - - PREDICTED: diphthine methyltransferase homolog [Jatropha curcas]
16 Hb_003688_100 0.0976659122 - - Uncharacterized protein TCM_002515 [Theobroma cacao]
17 Hb_003106_070 0.0978640724 - - PREDICTED: uncharacterized protein LOC105167687 [Sesamum indicum]
18 Hb_019962_030 0.0985567073 - - PREDICTED: uncharacterized protein LOC105650622 [Jatropha curcas]
19 Hb_001369_650 0.0990615312 - - PREDICTED: chloride conductance regulatory protein ICln [Jatropha curcas]
20 Hb_001720_010 0.0993394289 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002495_070 Hb_002495_070 Hb_004722_060 Hb_004722_060 Hb_002495_070--Hb_004722_060 Hb_000621_080 Hb_000621_080 Hb_002495_070--Hb_000621_080 Hb_000768_050 Hb_000768_050 Hb_002495_070--Hb_000768_050 Hb_005489_130 Hb_005489_130 Hb_002495_070--Hb_005489_130 Hb_002150_080 Hb_002150_080 Hb_002495_070--Hb_002150_080 Hb_010449_020 Hb_010449_020 Hb_002495_070--Hb_010449_020 Hb_019962_030 Hb_019962_030 Hb_004722_060--Hb_019962_030 Hb_003688_100 Hb_003688_100 Hb_004722_060--Hb_003688_100 Hb_000265_150 Hb_000265_150 Hb_004722_060--Hb_000265_150 Hb_000538_020 Hb_000538_020 Hb_004722_060--Hb_000538_020 Hb_004722_060--Hb_000621_080 Hb_000923_020 Hb_000923_020 Hb_000621_080--Hb_000923_020 Hb_000621_080--Hb_002150_080 Hb_086639_070 Hb_086639_070 Hb_000621_080--Hb_086639_070 Hb_001610_110 Hb_001610_110 Hb_000621_080--Hb_001610_110 Hb_000768_050--Hb_010449_020 Hb_003106_070 Hb_003106_070 Hb_000768_050--Hb_003106_070 Hb_000768_050--Hb_000265_150 Hb_000768_050--Hb_003688_100 Hb_000768_050--Hb_004722_060 Hb_000045_130 Hb_000045_130 Hb_005489_130--Hb_000045_130 Hb_005489_130--Hb_010449_020 Hb_005489_130--Hb_003688_100 Hb_005489_130--Hb_004722_060 Hb_000808_040 Hb_000808_040 Hb_005489_130--Hb_000808_040 Hb_159558_030 Hb_159558_030 Hb_005489_130--Hb_159558_030 Hb_000139_410 Hb_000139_410 Hb_002150_080--Hb_000139_410 Hb_010381_070 Hb_010381_070 Hb_002150_080--Hb_010381_070 Hb_002085_110 Hb_002085_110 Hb_002150_080--Hb_002085_110 Hb_002685_170 Hb_002685_170 Hb_002150_080--Hb_002685_170 Hb_003185_020 Hb_003185_020 Hb_010449_020--Hb_003185_020 Hb_000392_270 Hb_000392_270 Hb_010449_020--Hb_000392_270 Hb_010449_020--Hb_003688_100 Hb_010449_020--Hb_004722_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
78.7917 40.3433 21.3099 15.035 62.1814 54.1832
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
62.8974 76.2044 29.3858 26.117 5.63571

CAGE analysis