Hb_002498_100

Information

Type -
Description -
Location Contig2498: 52216-54616
Sequence    

Annotation

kegg
ID rcu:RCOM_0903750
description bcr-associated protein, bap, putative
nr
ID XP_002518447.1
description bcr-associated protein, bap, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RXH8
description Bcr-associated protein, bap, putative OS=Ricinus communis GN=RCOM_0903750 PE=4 SV=1
Gene Ontology
ID GO:0005783
description b-cell receptor-associated protein 31

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25983: 52261-54718 , PASA_asmbl_25986: 49438-54521
cDNA
(Sanger)
(ID:Location)		 016_E21.ab1: 52696-54555 , 024_B11.ab1: 54092-54554

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002498_100 0.0 - - bcr-associated protein, bap, putative [Ricinus communis]
2 Hb_000029_030 0.0855810227 - - PREDICTED: mitochondrial fission protein ELM1 [Jatropha curcas]
3 Hb_002368_050 0.0886415291 - - conserved hypothetical protein [Ricinus communis]
4 Hb_006693_030 0.0899035359 - - PREDICTED: ribonuclease H2 subunit A [Jatropha curcas]
5 Hb_000173_170 0.0960303783 - - PREDICTED: UPF0613 protein PB24D3.06c [Jatropha curcas]
6 Hb_010402_010 0.1007414665 - - BnaC06g23470D [Brassica napus]
7 Hb_007760_030 0.1040972914 transcription factor TF Family: M-type hypothetical protein JCGZ_15623 [Jatropha curcas]
8 Hb_001677_110 0.1066069802 - - Protein YIPF1, putative [Ricinus communis]
9 Hb_005918_040 0.1078620431 - - hypothetical protein POPTR_0003s04560g [Populus trichocarpa]
10 Hb_010174_120 0.1081106987 - - PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1-like [Gossypium raimondii]
11 Hb_011224_080 0.1124035767 - - PREDICTED: coiled-coil domain-containing protein 22 homolog isoform X1 [Jatropha curcas]
12 Hb_010174_130 0.1127589977 - - PREDICTED: regulator of G-protein signaling 1 [Jatropha curcas]
13 Hb_000956_010 0.1140901824 - - PREDICTED: polyadenylate-binding protein 2-like [Jatropha curcas]
14 Hb_007919_050 0.1141064257 - - PREDICTED: uncharacterized protein LOC105635142 isoform X2 [Jatropha curcas]
15 Hb_000023_140 0.1142018013 - - PREDICTED: cadmium-induced protein AS8 isoform X1 [Jatropha curcas]
16 Hb_183086_060 0.1142075195 desease resistance Gene Name: AAA PREDICTED: ATPase family AAA domain-containing protein 1-B [Jatropha curcas]
17 Hb_002681_110 0.1154466453 - - PREDICTED: uncharacterized protein LOC105633759 [Jatropha curcas]
18 Hb_000260_060 0.1159975718 - - PREDICTED: mannan endo-1,4-beta-mannosidase 6 [Jatropha curcas]
19 Hb_006788_070 0.1166937203 - - 2-methyl-6-geranylgeranylbenzoquinone methyltranferase [Hevea brasiliensis]
20 Hb_000025_480 0.1174827539 transcription factor TF Family: HB PREDICTED: homeobox protein 10 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002498_100 Hb_002498_100 Hb_000029_030 Hb_000029_030 Hb_002498_100--Hb_000029_030 Hb_002368_050 Hb_002368_050 Hb_002498_100--Hb_002368_050 Hb_006693_030 Hb_006693_030 Hb_002498_100--Hb_006693_030 Hb_000173_170 Hb_000173_170 Hb_002498_100--Hb_000173_170 Hb_010402_010 Hb_010402_010 Hb_002498_100--Hb_010402_010 Hb_007760_030 Hb_007760_030 Hb_002498_100--Hb_007760_030 Hb_000029_030--Hb_002368_050 Hb_000029_030--Hb_006693_030 Hb_001776_110 Hb_001776_110 Hb_000029_030--Hb_001776_110 Hb_000975_290 Hb_000975_290 Hb_000029_030--Hb_000975_290 Hb_001454_210 Hb_001454_210 Hb_000029_030--Hb_001454_210 Hb_011224_080 Hb_011224_080 Hb_000029_030--Hb_011224_080 Hb_002368_050--Hb_006693_030 Hb_000956_010 Hb_000956_010 Hb_002368_050--Hb_000956_010 Hb_000025_200 Hb_000025_200 Hb_002368_050--Hb_000025_200 Hb_002368_050--Hb_011224_080 Hb_007908_020 Hb_007908_020 Hb_002368_050--Hb_007908_020 Hb_006693_030--Hb_000956_010 Hb_004899_320 Hb_004899_320 Hb_006693_030--Hb_004899_320 Hb_006693_030--Hb_011224_080 Hb_004662_030 Hb_004662_030 Hb_006693_030--Hb_004662_030 Hb_000173_170--Hb_007760_030 Hb_007152_020 Hb_007152_020 Hb_000173_170--Hb_007152_020 Hb_001191_100 Hb_001191_100 Hb_000173_170--Hb_001191_100 Hb_002326_030 Hb_002326_030 Hb_000173_170--Hb_002326_030 Hb_065500_050 Hb_065500_050 Hb_000173_170--Hb_065500_050 Hb_000173_170--Hb_000956_010 Hb_000538_210 Hb_000538_210 Hb_010402_010--Hb_000538_210 Hb_004800_160 Hb_004800_160 Hb_010402_010--Hb_004800_160 Hb_010174_120 Hb_010174_120 Hb_010402_010--Hb_010174_120 Hb_010402_010--Hb_000173_170 Hb_000025_480 Hb_000025_480 Hb_010402_010--Hb_000025_480 Hb_007760_030--Hb_007152_020 Hb_001842_070 Hb_001842_070 Hb_007760_030--Hb_001842_070 Hb_007760_030--Hb_000025_480 Hb_007760_030--Hb_006693_030 Hb_007760_030--Hb_011224_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
73.6171 3.66419 13.8675 30.6392 68.0073 81.2544
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
75.5762 69.0096 104.258 14.7601 17.3397

CAGE analysis