Hb_002499_020

Information

Type -
Description -
Location Contig2499: 17798-19544
Sequence    

Annotation

kegg
ID rcu:RCOM_0481320
description hevamine-A precursor, putative (EC:3.2.1.17)
nr
ID XP_002530928.1
description hevamine-A precursor, putative [Ricinus communis]
swissprot
ID P51614
description Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1
trembl
ID B9SY59
description Hevamine-A, putative OS=Ricinus communis GN=RCOM_0481320 PE=3 SV=1
Gene Ontology
ID GO:0003796
description chitinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002499_020 0.0 - - hevamine-A precursor, putative [Ricinus communis]
2 Hb_046191_010 0.0792957554 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_010571_010 0.0815925749 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
4 Hb_006120_010 0.0998437745 - - invertase inhibitor [Manihot esculenta]
5 Hb_005056_030 0.1121094645 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
6 Hb_003469_030 0.1123581134 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
7 Hb_014115_010 0.1154268534 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_007181_080 0.1280203086 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
9 Hb_003058_180 0.1335994677 transcription factor TF Family: HSF hypothetical protein POPTR_0001s28040g [Populus trichocarpa]
10 Hb_000761_030 0.1395628805 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
11 Hb_000487_140 0.1437366336 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
12 Hb_000081_030 0.1438363623 - - BnaC09g05810D [Brassica napus]
13 Hb_012762_070 0.1450456784 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
14 Hb_000077_450 0.1460757061 - - o-methyltransferase, putative [Ricinus communis]
15 Hb_000099_020 0.1546881094 desease resistance Gene Name: ABC_membrane PREDICTED: uncharacterized protein LOC103431057 [Malus domestica]
16 Hb_021418_010 0.1578486993 - - PREDICTED: probable pectate lyase 12 [Prunus mume]
17 Hb_000608_080 0.1586800528 - - hypothetical protein JCGZ_22216 [Jatropha curcas]
18 Hb_001971_070 0.1604626792 - - unnamed protein product [Coffea canephora]
19 Hb_001522_050 0.1614700509 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Jatropha curcas]
20 Hb_000230_160 0.1625045072 - - PREDICTED: uncharacterized protein LOC105631858 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002499_020 Hb_002499_020 Hb_046191_010 Hb_046191_010 Hb_002499_020--Hb_046191_010 Hb_010571_010 Hb_010571_010 Hb_002499_020--Hb_010571_010 Hb_006120_010 Hb_006120_010 Hb_002499_020--Hb_006120_010 Hb_005056_030 Hb_005056_030 Hb_002499_020--Hb_005056_030 Hb_003469_030 Hb_003469_030 Hb_002499_020--Hb_003469_030 Hb_014115_010 Hb_014115_010 Hb_002499_020--Hb_014115_010 Hb_046191_010--Hb_014115_010 Hb_046191_010--Hb_010571_010 Hb_046191_010--Hb_003469_030 Hb_046191_010--Hb_005056_030 Hb_046191_010--Hb_006120_010 Hb_010571_010--Hb_003469_030 Hb_010571_010--Hb_006120_010 Hb_007181_080 Hb_007181_080 Hb_010571_010--Hb_007181_080 Hb_010571_010--Hb_005056_030 Hb_003058_180 Hb_003058_180 Hb_006120_010--Hb_003058_180 Hb_000230_160 Hb_000230_160 Hb_006120_010--Hb_000230_160 Hb_000077_450 Hb_000077_450 Hb_006120_010--Hb_000077_450 Hb_188923_010 Hb_188923_010 Hb_006120_010--Hb_188923_010 Hb_006268_010 Hb_006268_010 Hb_005056_030--Hb_006268_010 Hb_002622_020 Hb_002622_020 Hb_005056_030--Hb_002622_020 Hb_012762_070 Hb_012762_070 Hb_005056_030--Hb_012762_070 Hb_000761_030 Hb_000761_030 Hb_005056_030--Hb_000761_030 Hb_000472_030 Hb_000472_030 Hb_005056_030--Hb_000472_030 Hb_095532_010 Hb_095532_010 Hb_003469_030--Hb_095532_010 Hb_003469_030--Hb_014115_010 Hb_001522_050 Hb_001522_050 Hb_003469_030--Hb_001522_050 Hb_000306_050 Hb_000306_050 Hb_014115_010--Hb_000306_050 Hb_014115_010--Hb_005056_030 Hb_000081_030 Hb_000081_030 Hb_014115_010--Hb_000081_030 Hb_014115_010--Hb_000761_030 Hb_014115_010--Hb_006120_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.97366 0.0530908 10.7811 0.0682462 0.0665115
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.115754 21.2546 0.0643948

CAGE analysis