Hb_002499_030

Information

Type -
Description -
Location Contig2499: 31841-35157
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID XP_002517677.1
description receptor-kinase, putative [Ricinus communis]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID B9RVA8
description Receptor-kinase, putative OS=Ricinus communis GN=RCOM_0901450 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002499_030 0.0 - - receptor-kinase, putative [Ricinus communis]
2 Hb_001096_010 0.059649033 - - PREDICTED: uncharacterized protein LOC105650448 [Jatropha curcas]
3 Hb_005614_020 0.0601871553 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X1 [Jatropha curcas]
4 Hb_070771_010 0.0614741973 - - PREDICTED: uncharacterized membrane protein At1g06890 [Jatropha curcas]
5 Hb_003747_160 0.0620179058 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003638_020 0.0623807325 - - PREDICTED: uncharacterized protein LOC105645807 [Jatropha curcas]
7 Hb_001269_160 0.0648902713 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002085_060 0.0654990898 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000339_060 0.0667697547 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
10 Hb_011224_070 0.0699182268 - - PREDICTED: solute carrier family 35 member E3 [Jatropha curcas]
11 Hb_001511_220 0.07263381 - - hypothetical protein POPTR_0008s06990g [Populus trichocarpa]
12 Hb_064047_020 0.0726502215 transcription factor TF Family: MYB hypothetical protein POPTR_0003s13190g [Populus trichocarpa]
13 Hb_015807_090 0.0752948467 - - PREDICTED: probable galacturonosyltransferase 12 [Jatropha curcas]
14 Hb_000413_030 0.0756984619 - - PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]
15 Hb_009476_080 0.0783920145 - - BnaA03g18920D [Brassica napus]
16 Hb_004225_120 0.0785032002 - - PREDICTED: uncharacterized protein LOC105628059 [Jatropha curcas]
17 Hb_003376_060 0.0832243729 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9 isoform X1 [Jatropha curcas]
18 Hb_002171_050 0.0841996587 - - PREDICTED: leucine-rich repeat receptor-like protein kinase PEPR1 [Populus euphratica]
19 Hb_001051_060 0.0865097829 - - UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative [Ricinus communis]
20 Hb_042083_010 0.0869268992 - - PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming] [Jatropha curcas]

Gene co-expression network

sample Hb_002499_030 Hb_002499_030 Hb_001096_010 Hb_001096_010 Hb_002499_030--Hb_001096_010 Hb_005614_020 Hb_005614_020 Hb_002499_030--Hb_005614_020 Hb_070771_010 Hb_070771_010 Hb_002499_030--Hb_070771_010 Hb_003747_160 Hb_003747_160 Hb_002499_030--Hb_003747_160 Hb_003638_020 Hb_003638_020 Hb_002499_030--Hb_003638_020 Hb_001269_160 Hb_001269_160 Hb_002499_030--Hb_001269_160 Hb_011224_070 Hb_011224_070 Hb_001096_010--Hb_011224_070 Hb_001096_010--Hb_005614_020 Hb_001096_010--Hb_003747_160 Hb_001511_220 Hb_001511_220 Hb_001096_010--Hb_001511_220 Hb_001195_710 Hb_001195_710 Hb_001096_010--Hb_001195_710 Hb_005614_020--Hb_003747_160 Hb_005614_020--Hb_011224_070 Hb_015807_090 Hb_015807_090 Hb_005614_020--Hb_015807_090 Hb_004225_120 Hb_004225_120 Hb_005614_020--Hb_004225_120 Hb_042083_010 Hb_042083_010 Hb_005614_020--Hb_042083_010 Hb_002085_060 Hb_002085_060 Hb_070771_010--Hb_002085_060 Hb_000339_060 Hb_000339_060 Hb_070771_010--Hb_000339_060 Hb_001307_180 Hb_001307_180 Hb_070771_010--Hb_001307_180 Hb_011912_010 Hb_011912_010 Hb_070771_010--Hb_011912_010 Hb_003645_040 Hb_003645_040 Hb_070771_010--Hb_003645_040 Hb_070771_010--Hb_003638_020 Hb_001051_060 Hb_001051_060 Hb_003747_160--Hb_001051_060 Hb_003747_160--Hb_015807_090 Hb_003747_160--Hb_011224_070 Hb_005686_040 Hb_005686_040 Hb_003747_160--Hb_005686_040 Hb_009476_080 Hb_009476_080 Hb_003747_160--Hb_009476_080 Hb_003747_160--Hb_004225_120 Hb_003638_020--Hb_000339_060 Hb_003638_020--Hb_002085_060 Hb_001722_110 Hb_001722_110 Hb_003638_020--Hb_001722_110 Hb_003638_020--Hb_005614_020 Hb_000413_030 Hb_000413_030 Hb_001269_160--Hb_000413_030 Hb_001269_160--Hb_009476_080 Hb_001269_160--Hb_011224_070 Hb_064047_020 Hb_064047_020 Hb_001269_160--Hb_064047_020 Hb_001269_160--Hb_003747_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0177459 0.017946 0.256126 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00423329 0.11403

CAGE analysis