Hb_002539_100

Information

Type -
Description -
Location Contig2539: 95811-97053
Sequence    

Annotation

kegg
ID rcu:RCOM_1620970
description 14-3-3 protein, putative
nr
ID XP_012067762.1
description PREDICTED: 14-3-3-like protein GF14 iota [Jatropha curcas]
swissprot
ID Q9C5W6
description 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1
trembl
ID A0A067KYS6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15699 PE=3 SV=1
Gene Ontology
ID GO:0019904
description 14-3-3-like protein gf14 iota

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002539_100 0.0 - - PREDICTED: 14-3-3-like protein GF14 iota [Jatropha curcas]
2 Hb_028049_010 0.1332326536 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
3 Hb_012305_130 0.1571892252 - - PREDICTED: GTP-binding protein SAR1A [Jatropha curcas]
4 Hb_000407_070 0.1590784814 - - PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Jatropha curcas]
5 Hb_000110_120 0.1712931818 - - PREDICTED: ras-related protein RABE1a [Fragaria vesca subsp. vesca]
6 Hb_021409_080 0.1785277171 - - PREDICTED: ORM1-like protein 1 [Jatropha curcas]
7 Hb_005914_110 0.1809817148 - - PREDICTED: uncharacterized protein LOC105632180 [Jatropha curcas]
8 Hb_000392_340 0.1853646861 - - PREDICTED: vacuolar protein sorting-associated protein 29 [Jatropha curcas]
9 Hb_002249_070 0.1883933162 - - gcn4-complementing protein, putative [Ricinus communis]
10 Hb_111985_110 0.1887889449 - - thioredoxin H-type 3 [Hevea brasiliensis]
11 Hb_001234_070 0.1895090164 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Populus euphratica]
12 Hb_000365_270 0.1898386634 - - PREDICTED: uncharacterized protein LOC105649060 [Jatropha curcas]
13 Hb_001863_130 0.1903661882 - - hypothetical protein ZEAMMB73_433257, partial [Zea mays]
14 Hb_000217_020 0.1904492965 - - AMME syndrome candidateprotein 1 protein, putative [Ricinus communis]
15 Hb_007441_240 0.1905569456 - - ethphon-induced protein [Hevea brasiliensis]
16 Hb_004984_030 0.1928865114 - - protein with unknown function [Ricinus communis]
17 Hb_004814_010 0.1933969632 - - PREDICTED: uncharacterized protein LOC105633486 [Jatropha curcas]
18 Hb_000742_020 0.1940295495 - - ARF GTPase activator, putative [Ricinus communis]
19 Hb_005054_080 0.1946243428 transcription factor TF Family: LIM Pollen-specific protein SF3, putative [Ricinus communis]
20 Hb_027073_010 0.1950949876 - - PREDICTED: protein CHROMOSOME TRANSMISSION FIDELITY 7 [Jatropha curcas]

Gene co-expression network

sample Hb_002539_100 Hb_002539_100 Hb_028049_010 Hb_028049_010 Hb_002539_100--Hb_028049_010 Hb_012305_130 Hb_012305_130 Hb_002539_100--Hb_012305_130 Hb_000407_070 Hb_000407_070 Hb_002539_100--Hb_000407_070 Hb_000110_120 Hb_000110_120 Hb_002539_100--Hb_000110_120 Hb_021409_080 Hb_021409_080 Hb_002539_100--Hb_021409_080 Hb_005914_110 Hb_005914_110 Hb_002539_100--Hb_005914_110 Hb_028049_010--Hb_012305_130 Hb_028049_010--Hb_000110_120 Hb_004007_110 Hb_004007_110 Hb_028049_010--Hb_004007_110 Hb_028049_010--Hb_021409_080 Hb_000771_060 Hb_000771_060 Hb_028049_010--Hb_000771_060 Hb_000428_060 Hb_000428_060 Hb_028049_010--Hb_000428_060 Hb_012305_130--Hb_021409_080 Hb_012305_130--Hb_000110_120 Hb_000964_030 Hb_000964_030 Hb_012305_130--Hb_000964_030 Hb_002110_100 Hb_002110_100 Hb_012305_130--Hb_002110_100 Hb_004627_030 Hb_004627_030 Hb_012305_130--Hb_004627_030 Hb_111985_110 Hb_111985_110 Hb_000407_070--Hb_111985_110 Hb_000407_070--Hb_012305_130 Hb_000407_070--Hb_021409_080 Hb_002301_160 Hb_002301_160 Hb_000407_070--Hb_002301_160 Hb_000407_070--Hb_004627_030 Hb_000009_290 Hb_000009_290 Hb_000407_070--Hb_000009_290 Hb_000110_120--Hb_002301_160 Hb_005460_060 Hb_005460_060 Hb_000110_120--Hb_005460_060 Hb_000110_120--Hb_000009_290 Hb_000110_120--Hb_004627_030 Hb_000077_180 Hb_000077_180 Hb_000110_120--Hb_000077_180 Hb_021409_080--Hb_111985_110 Hb_021409_080--Hb_004627_030 Hb_180343_010 Hb_180343_010 Hb_021409_080--Hb_180343_010 Hb_021409_080--Hb_002110_100 Hb_021409_080--Hb_000110_120 Hb_000365_270 Hb_000365_270 Hb_005914_110--Hb_000365_270 Hb_053709_050 Hb_053709_050 Hb_005914_110--Hb_053709_050 Hb_000723_230 Hb_000723_230 Hb_005914_110--Hb_000723_230 Hb_000926_200 Hb_000926_200 Hb_005914_110--Hb_000926_200 Hb_000622_130 Hb_000622_130 Hb_005914_110--Hb_000622_130 Hb_005867_090 Hb_005867_090 Hb_005914_110--Hb_005867_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.489377 0.266762 0.754171 1.41434 0 0.101922
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.49114 0.827501 0.497588 0.379993 0.331232

CAGE analysis