Hb_002542_060

Information

Type -
Description -
Location Contig2542: 73835-78610
Sequence    

Annotation

kegg
ID rcu:RCOM_1439480
description ATP binding protein, putative (EC:2.7.12.2)
nr
ID XP_012082711.1
description PREDICTED: wee1-like protein kinase [Jatropha curcas]
swissprot
ID Q8L4H0
description Wee1-like protein kinase OS=Arabidopsis thaliana GN=WEE1 PE=1 SV=1
trembl
ID A0A067JW33
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13883 PE=3 SV=1
Gene Ontology
ID GO:0004674
description wee1-like protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002542_060 0.0 - - PREDICTED: wee1-like protein kinase [Jatropha curcas]
2 Hb_003006_090 0.1122415553 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming] isoform X2 [Jatropha curcas]
3 Hb_000099_170 0.1177888264 - - PREDICTED: uncharacterized protein LOC105645733 [Jatropha curcas]
4 Hb_000357_070 0.1305549202 - - -
5 Hb_001017_130 0.1339780498 - - hypothetical protein POPTR_0010s06070g [Populus trichocarpa]
6 Hb_000805_010 0.1353503062 - - PREDICTED: uncharacterized protein LOC105629931 [Jatropha curcas]
7 Hb_001153_100 0.1364038114 transcription factor TF Family: HB PREDICTED: homeobox protein HD1 [Jatropha curcas]
8 Hb_003462_040 0.1377435265 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
9 Hb_003226_250 0.1393329393 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
10 Hb_002662_110 0.1393460112 - - Kinesin heavy chain, putative [Ricinus communis]
11 Hb_001677_040 0.1419890277 - - PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Jatropha curcas]
12 Hb_001369_010 0.1426053377 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
13 Hb_001195_660 0.1431238276 - - metalloendopeptidase, putative [Ricinus communis]
14 Hb_000056_110 0.1438873 - - PREDICTED: uncharacterized protein LOC105630405 [Jatropha curcas]
15 Hb_000347_190 0.147715108 - - PREDICTED: transmembrane protein 87A [Jatropha curcas]
16 Hb_003935_070 0.1504089773 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
17 Hb_000140_060 0.1512445776 - - 50S ribosomal protein L5, putative [Ricinus communis]
18 Hb_000417_050 0.1515134834 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1 [Jatropha curcas]
19 Hb_000388_080 0.1517990272 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
20 Hb_006750_010 0.1525596178 - - Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]

Gene co-expression network

sample Hb_002542_060 Hb_002542_060 Hb_003006_090 Hb_003006_090 Hb_002542_060--Hb_003006_090 Hb_000099_170 Hb_000099_170 Hb_002542_060--Hb_000099_170 Hb_000357_070 Hb_000357_070 Hb_002542_060--Hb_000357_070 Hb_001017_130 Hb_001017_130 Hb_002542_060--Hb_001017_130 Hb_000805_010 Hb_000805_010 Hb_002542_060--Hb_000805_010 Hb_001153_100 Hb_001153_100 Hb_002542_060--Hb_001153_100 Hb_000271_220 Hb_000271_220 Hb_003006_090--Hb_000271_220 Hb_003462_040 Hb_003462_040 Hb_003006_090--Hb_003462_040 Hb_001195_660 Hb_001195_660 Hb_003006_090--Hb_001195_660 Hb_001677_040 Hb_001677_040 Hb_003006_090--Hb_001677_040 Hb_000603_020 Hb_000603_020 Hb_003006_090--Hb_000603_020 Hb_071079_020 Hb_071079_020 Hb_000099_170--Hb_071079_020 Hb_000108_150 Hb_000108_150 Hb_000099_170--Hb_000108_150 Hb_002675_080 Hb_002675_080 Hb_000099_170--Hb_002675_080 Hb_000322_030 Hb_000322_030 Hb_000099_170--Hb_000322_030 Hb_005181_120 Hb_005181_120 Hb_000099_170--Hb_005181_120 Hb_000061_250 Hb_000061_250 Hb_000099_170--Hb_000061_250 Hb_034579_020 Hb_034579_020 Hb_000357_070--Hb_034579_020 Hb_000388_080 Hb_000388_080 Hb_000357_070--Hb_000388_080 Hb_002028_110 Hb_002028_110 Hb_000357_070--Hb_002028_110 Hb_000635_050 Hb_000635_050 Hb_000357_070--Hb_000635_050 Hb_000357_070--Hb_002675_080 Hb_000283_140 Hb_000283_140 Hb_000357_070--Hb_000283_140 Hb_001180_010 Hb_001180_010 Hb_001017_130--Hb_001180_010 Hb_001544_050 Hb_001544_050 Hb_001017_130--Hb_001544_050 Hb_001017_130--Hb_000388_080 Hb_002701_070 Hb_002701_070 Hb_001017_130--Hb_002701_070 Hb_001433_150 Hb_001433_150 Hb_001017_130--Hb_001433_150 Hb_004994_330 Hb_004994_330 Hb_001017_130--Hb_004994_330 Hb_003935_070 Hb_003935_070 Hb_000805_010--Hb_003935_070 Hb_015141_010 Hb_015141_010 Hb_000805_010--Hb_015141_010 Hb_002759_220 Hb_002759_220 Hb_000805_010--Hb_002759_220 Hb_002817_040 Hb_002817_040 Hb_000805_010--Hb_002817_040 Hb_002235_110 Hb_002235_110 Hb_000805_010--Hb_002235_110 Hb_000395_010 Hb_000395_010 Hb_000805_010--Hb_000395_010 Hb_005731_100 Hb_005731_100 Hb_001153_100--Hb_005731_100 Hb_001153_100--Hb_000357_070 Hb_001153_100--Hb_001433_150 Hb_002835_280 Hb_002835_280 Hb_001153_100--Hb_002835_280 Hb_022425_050 Hb_022425_050 Hb_001153_100--Hb_022425_050 Hb_001153_100--Hb_034579_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.377936 0.452328 1.21485 1.9177 0.0662079 0.113873
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0966544 0.126732 0.142712 0.253028 2.22454

CAGE analysis