Hb_002566_010

Information

Type -
Description -
Location Contig2566: 23822-25509
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012084624.1
description PREDICTED: uncharacterized protein LOC105643984 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9W2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15081 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002566_010 0.0 - - PREDICTED: uncharacterized protein LOC105643984 isoform X1 [Jatropha curcas]
2 Hb_000982_120 0.0719860568 transcription factor TF Family: Orphans sensory transduction histidine kinase bacterial, putative [Ricinus communis]
3 Hb_031931_030 0.0910175251 - - lipid binding protein, putative [Ricinus communis]
4 Hb_059780_010 0.0951396487 - - PREDICTED: uncharacterized protein LOC104885482, partial [Beta vulgaris subsp. vulgaris]
5 Hb_145211_010 0.1254044286 - - hypothetical protein M569_05648, partial [Genlisea aurea]
6 Hb_010761_030 0.1286853222 - - cytochrome P450, putative [Ricinus communis]
7 Hb_000149_090 0.1289347821 - - -
8 Hb_029769_010 0.1300549557 - - PREDICTED: putative disease resistance protein RGA3 isoform X3 [Populus euphratica]
9 Hb_121441_010 0.1327611536 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
10 Hb_000675_040 0.1526336116 - - hypothetical protein OsI_02937 [Oryza sativa Indica Group]
11 Hb_002900_040 0.1582934917 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Populus euphratica]
12 Hb_008692_020 0.1595292868 - - -
13 Hb_000207_340 0.1662453345 transcription factor TF Family: GRAS hypothetical protein POPTR_0013s11930g [Populus trichocarpa]
14 Hb_000946_030 0.1662515093 - - hypothetical protein JCGZ_10707 [Jatropha curcas]
15 Hb_130563_010 0.1775230197 - - PREDICTED: ABC transporter C family member 3-like isoform X1 [Jatropha curcas]
16 Hb_078081_020 0.1806823046 - - -
17 Hb_011671_420 0.1830322561 - - hypothetical protein POPTR_0015s12340g [Populus trichocarpa]
18 Hb_000330_120 0.1852758553 - - PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Nelumbo nucifera]
19 Hb_036069_020 0.1860177888 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
20 Hb_010926_030 0.1876294207 - - hypothetical protein CISIN_1g037967mg, partial [Citrus sinensis]

Gene co-expression network

sample Hb_002566_010 Hb_002566_010 Hb_000982_120 Hb_000982_120 Hb_002566_010--Hb_000982_120 Hb_031931_030 Hb_031931_030 Hb_002566_010--Hb_031931_030 Hb_059780_010 Hb_059780_010 Hb_002566_010--Hb_059780_010 Hb_145211_010 Hb_145211_010 Hb_002566_010--Hb_145211_010 Hb_010761_030 Hb_010761_030 Hb_002566_010--Hb_010761_030 Hb_000149_090 Hb_000149_090 Hb_002566_010--Hb_000149_090 Hb_000982_120--Hb_059780_010 Hb_121441_010 Hb_121441_010 Hb_000982_120--Hb_121441_010 Hb_000982_120--Hb_031931_030 Hb_002900_040 Hb_002900_040 Hb_000982_120--Hb_002900_040 Hb_000982_120--Hb_145211_010 Hb_031931_030--Hb_010761_030 Hb_029769_010 Hb_029769_010 Hb_031931_030--Hb_029769_010 Hb_008692_020 Hb_008692_020 Hb_031931_030--Hb_008692_020 Hb_130563_010 Hb_130563_010 Hb_031931_030--Hb_130563_010 Hb_059780_010--Hb_145211_010 Hb_000675_040 Hb_000675_040 Hb_059780_010--Hb_000675_040 Hb_059780_010--Hb_121441_010 Hb_059780_010--Hb_031931_030 Hb_145211_010--Hb_000675_040 Hb_000946_030 Hb_000946_030 Hb_145211_010--Hb_000946_030 Hb_145211_010--Hb_121441_010 Hb_002122_050 Hb_002122_050 Hb_145211_010--Hb_002122_050 Hb_010761_030--Hb_008692_020 Hb_002870_010 Hb_002870_010 Hb_010761_030--Hb_002870_010 Hb_010761_030--Hb_029769_010 Hb_001136_030 Hb_001136_030 Hb_010761_030--Hb_001136_030 Hb_009510_060 Hb_009510_060 Hb_000149_090--Hb_009510_060 Hb_010926_030 Hb_010926_030 Hb_000149_090--Hb_010926_030 Hb_000149_090--Hb_121441_010 Hb_000644_040 Hb_000644_040 Hb_000149_090--Hb_000644_040 Hb_000149_090--Hb_008692_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0317989 0 0.0839126 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.300142 0.113659

CAGE analysis