Hb_002582_080

Information

Type -
Description -
Location Contig2582: 140331-141357
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0004022
description cinnamoyl- reductase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002582_080 0.0 - - -
2 Hb_000302_110 0.1550851674 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_004925_030 0.1784856012 - - EXORDIUM like 1 [Theobroma cacao]
4 Hb_000302_100 0.2047142033 - - PREDICTED: uncharacterized protein LOC105766209 [Gossypium raimondii]
5 Hb_011918_010 0.2068920066 - - hypothetical protein glysoja_041948 [Glycine soja]
6 Hb_034299_070 0.2112045836 - - actin binding protein, putative [Ricinus communis]
7 Hb_001329_020 0.2211039029 - - PREDICTED: probable boron transporter 2 [Populus euphratica]
8 Hb_003894_020 0.2218634001 - - plant sec1, putative [Ricinus communis]
9 Hb_000311_040 0.2230173384 - - PREDICTED: S-formylglutathione hydrolase [Jatropha curcas]
10 Hb_007575_090 0.2240322986 - - putative. proteolipid subunit of vacuolar H+ ATPase, partial [Zea mays]
11 Hb_156850_040 0.2254886208 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
12 Hb_004125_070 0.2265376274 - - Glycolipid transfer protein, putative [Ricinus communis]
13 Hb_000358_130 0.2310899111 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
14 Hb_003952_080 0.2320425338 - - zinc finger protein, putative [Ricinus communis]
15 Hb_000313_280 0.2332216002 - - hypothetical protein PRUPE_ppa014856mg, partial [Prunus persica]
16 Hb_131684_010 0.2342176314 - - conserved hypothetical protein [Ricinus communis]
17 Hb_104571_010 0.2349962953 - - PREDICTED: metal transporter Nramp1 [Jatropha curcas]
18 Hb_096499_010 0.2362277299 - - hypothetical protein JCGZ_14833 [Jatropha curcas]
19 Hb_005529_020 0.2386604391 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 32 [Jatropha curcas]
20 Hb_000521_070 0.2393247497 - - PREDICTED: uncharacterized protein LOC105650323 [Jatropha curcas]

Gene co-expression network

sample Hb_002582_080 Hb_002582_080 Hb_000302_110 Hb_000302_110 Hb_002582_080--Hb_000302_110 Hb_004925_030 Hb_004925_030 Hb_002582_080--Hb_004925_030 Hb_000302_100 Hb_000302_100 Hb_002582_080--Hb_000302_100 Hb_011918_010 Hb_011918_010 Hb_002582_080--Hb_011918_010 Hb_034299_070 Hb_034299_070 Hb_002582_080--Hb_034299_070 Hb_001329_020 Hb_001329_020 Hb_002582_080--Hb_001329_020 Hb_000302_110--Hb_004925_030 Hb_000521_070 Hb_000521_070 Hb_000302_110--Hb_000521_070 Hb_007575_090 Hb_007575_090 Hb_000302_110--Hb_007575_090 Hb_007741_090 Hb_007741_090 Hb_000302_110--Hb_007741_090 Hb_156850_040 Hb_156850_040 Hb_000302_110--Hb_156850_040 Hb_004925_030--Hb_000521_070 Hb_004925_030--Hb_007741_090 Hb_004925_030--Hb_156850_040 Hb_000236_210 Hb_000236_210 Hb_004925_030--Hb_000236_210 Hb_066514_010 Hb_066514_010 Hb_000302_100--Hb_066514_010 Hb_002272_200 Hb_002272_200 Hb_000302_100--Hb_002272_200 Hb_001357_030 Hb_001357_030 Hb_000302_100--Hb_001357_030 Hb_160405_010 Hb_160405_010 Hb_000302_100--Hb_160405_010 Hb_000302_100--Hb_007575_090 Hb_000302_100--Hb_001329_020 Hb_011918_010--Hb_007575_090 Hb_011918_010--Hb_066514_010 Hb_184541_010 Hb_184541_010 Hb_011918_010--Hb_184541_010 Hb_002900_100 Hb_002900_100 Hb_011918_010--Hb_002900_100 Hb_004125_070 Hb_004125_070 Hb_011918_010--Hb_004125_070 Hb_002490_030 Hb_002490_030 Hb_011918_010--Hb_002490_030 Hb_131684_010 Hb_131684_010 Hb_034299_070--Hb_131684_010 Hb_004453_070 Hb_004453_070 Hb_034299_070--Hb_004453_070 Hb_000796_020 Hb_000796_020 Hb_034299_070--Hb_000796_020 Hb_104571_010 Hb_104571_010 Hb_034299_070--Hb_104571_010 Hb_004162_060 Hb_004162_060 Hb_034299_070--Hb_004162_060 Hb_002122_060 Hb_002122_060 Hb_001329_020--Hb_002122_060 Hb_004117_330 Hb_004117_330 Hb_001329_020--Hb_004117_330 Hb_003536_090 Hb_003536_090 Hb_001329_020--Hb_003536_090 Hb_012753_180 Hb_012753_180 Hb_001329_020--Hb_012753_180 Hb_000707_040 Hb_000707_040 Hb_001329_020--Hb_000707_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.97739 15.7675 2.72671 134.424 3.57733 3.81028
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.5952 4.12704 5.15709 9.8664 3.50703

CAGE analysis