Hb_002596_040

Information

Type -
Description -
Location Contig2596: 31198-35080
Sequence    

Annotation

kegg
ID rcu:RCOM_0424520
description hypothetical protein
nr
ID XP_012086217.1
description PREDICTED: uncharacterized protein LOC105645264 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JTC8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21121 PE=4 SV=1
Gene Ontology
ID GO:0016874
description mical c-terminal-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26901: 31133-35063
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002596_040 0.0 - - PREDICTED: uncharacterized protein LOC105645264 isoform X2 [Jatropha curcas]
2 Hb_002296_040 0.0705883881 - - PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha curcas]
3 Hb_076693_030 0.0757215721 - - PREDICTED: serine/arginine-rich-splicing factor SR34-like [Populus euphratica]
4 Hb_008695_040 0.0818638343 - - PREDICTED: small ribosomal subunit protein S13, mitochondrial-like [Jatropha curcas]
5 Hb_001421_060 0.0845882556 - - PREDICTED: tobamovirus multiplication protein 2B isoform X2 [Jatropha curcas]
6 Hb_010180_010 0.0859549647 - - PREDICTED: uncharacterized protein LOC105631104 [Jatropha curcas]
7 Hb_002662_030 0.0864189528 - - PREDICTED: mannose-P-dolichol utilization defect 1 protein homolog 2 [Jatropha curcas]
8 Hb_001824_010 0.0874816611 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
9 Hb_002260_150 0.0906036095 - - PREDICTED: uncharacterized protein LOC105647187 isoform X2 [Jatropha curcas]
10 Hb_007735_030 0.0919346676 - - Calcium-binding EF-hand family protein isoform 1 [Theobroma cacao]
11 Hb_000840_190 0.0934851608 - - 60S ribosomal protein L10, mitochondrial, putative [Ricinus communis]
12 Hb_000103_090 0.095150134 - - PREDICTED: protein RDM1 [Jatropha curcas]
13 Hb_000030_220 0.0972615071 - - PREDICTED: uncharacterized protein LOC105650405 [Jatropha curcas]
14 Hb_010423_040 0.0975308785 - - hypothetical protein JCGZ_17463 [Jatropha curcas]
15 Hb_001047_240 0.1020855514 transcription factor TF Family: GNAT PREDICTED: N-alpha-acetyltransferase 20-like [Jatropha curcas]
16 Hb_003633_030 0.1042984407 - - f-actin capping protein alpha, putative [Ricinus communis]
17 Hb_032717_080 0.1044109711 - - gamma-soluble nsf attachment protein, putative [Ricinus communis]
18 Hb_000331_450 0.1045975927 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Jatropha curcas]
19 Hb_002890_140 0.1055457334 - - PREDICTED: uncharacterized protein LOC100263805 [Vitis vinifera]
20 Hb_002473_130 0.1059802454 - - PREDICTED: THO complex subunit 3 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002596_040 Hb_002596_040 Hb_002296_040 Hb_002296_040 Hb_002596_040--Hb_002296_040 Hb_076693_030 Hb_076693_030 Hb_002596_040--Hb_076693_030 Hb_008695_040 Hb_008695_040 Hb_002596_040--Hb_008695_040 Hb_001421_060 Hb_001421_060 Hb_002596_040--Hb_001421_060 Hb_010180_010 Hb_010180_010 Hb_002596_040--Hb_010180_010 Hb_002662_030 Hb_002662_030 Hb_002596_040--Hb_002662_030 Hb_002296_040--Hb_002662_030 Hb_002260_150 Hb_002260_150 Hb_002296_040--Hb_002260_150 Hb_000326_090 Hb_000326_090 Hb_002296_040--Hb_000326_090 Hb_000707_030 Hb_000707_030 Hb_002296_040--Hb_000707_030 Hb_007735_030 Hb_007735_030 Hb_002296_040--Hb_007735_030 Hb_001047_240 Hb_001047_240 Hb_076693_030--Hb_001047_240 Hb_001824_010 Hb_001824_010 Hb_076693_030--Hb_001824_010 Hb_076693_030--Hb_008695_040 Hb_007875_030 Hb_007875_030 Hb_076693_030--Hb_007875_030 Hb_076693_030--Hb_007735_030 Hb_000840_190 Hb_000840_190 Hb_008695_040--Hb_000840_190 Hb_008695_040--Hb_001824_010 Hb_008695_040--Hb_001421_060 Hb_002805_220 Hb_002805_220 Hb_008695_040--Hb_002805_220 Hb_003599_040 Hb_003599_040 Hb_001421_060--Hb_003599_040 Hb_000373_120 Hb_000373_120 Hb_001421_060--Hb_000373_120 Hb_001016_030 Hb_001016_030 Hb_001421_060--Hb_001016_030 Hb_000103_090 Hb_000103_090 Hb_001421_060--Hb_000103_090 Hb_006816_530 Hb_006816_530 Hb_001421_060--Hb_006816_530 Hb_015807_040 Hb_015807_040 Hb_001421_060--Hb_015807_040 Hb_143398_010 Hb_143398_010 Hb_010180_010--Hb_143398_010 Hb_001998_230 Hb_001998_230 Hb_010180_010--Hb_001998_230 Hb_004306_020 Hb_004306_020 Hb_010180_010--Hb_004306_020 Hb_002890_140 Hb_002890_140 Hb_010180_010--Hb_002890_140 Hb_000329_030 Hb_000329_030 Hb_010180_010--Hb_000329_030 Hb_010180_020 Hb_010180_020 Hb_010180_010--Hb_010180_020 Hb_000792_130 Hb_000792_130 Hb_002662_030--Hb_000792_130 Hb_002662_030--Hb_008695_040 Hb_005400_030 Hb_005400_030 Hb_002662_030--Hb_005400_030 Hb_000656_170 Hb_000656_170 Hb_002662_030--Hb_000656_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.4865 7.06255 12.378 28.5397 18.2378 44.3007
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
51.56 45.6609 20.3125 29.3994 11.9834

CAGE analysis