Hb_002596_080

Information

Type -
Description -
Location Contig2596: 90573-108769
Sequence    

Annotation

kegg
ID pop:POPTR_0016s04250g
description POPTRDRAFT_777084; phosphate translocator-related family protein
nr
ID XP_012086213.1
description PREDICTED: probable sugar phosphate/phosphate translocator At5g04160 [Jatropha curcas]
swissprot
ID Q9FYE5
description Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1
trembl
ID A0A067JQB8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21120 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable sugar phosphate phosphate translocator at5g04160

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26907: 90740-96930 , PASA_asmbl_26908: 92295-92477
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002596_080 0.0 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g04160 [Jatropha curcas]
2 Hb_011310_040 0.0987278178 transcription factor TF Family: bZIP transcription factor hy5, putative [Ricinus communis]
3 Hb_001493_060 0.1125503794 - - PREDICTED: uncharacterized protein LOC105631313 [Jatropha curcas]
4 Hb_002157_270 0.115654222 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
5 Hb_003226_250 0.1156970577 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
6 Hb_001195_090 0.1169959537 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
7 Hb_000445_150 0.1255765399 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
8 Hb_002129_020 0.1323471624 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX14 [Jatropha curcas]
9 Hb_001195_380 0.133526949 - - PREDICTED: uncharacterized protein LOC105633781 [Jatropha curcas]
10 Hb_006750_010 0.1392939682 - - Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]
11 Hb_000580_110 0.1408883658 - - PREDICTED: UDP-glucuronate 4-epimerase 3 [Jatropha curcas]
12 Hb_000417_170 0.1428226386 - - PREDICTED: uncharacterized protein LOC105649689 [Jatropha curcas]
13 Hb_003462_040 0.1460489405 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
14 Hb_002164_020 0.1481607346 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000246_130 0.1500418164 - - tubulin alpha chain, putative [Ricinus communis]
16 Hb_000808_150 0.1504006163 - - PREDICTED: uncharacterized protein LOC105647444 [Jatropha curcas]
17 Hb_000107_350 0.1545092512 - - PREDICTED: uncharacterized protein LOC105635576 [Jatropha curcas]
18 Hb_000417_380 0.1549753415 - - SecY protein transport family protein [Theobroma cacao]
19 Hb_003006_090 0.1587136086 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming] isoform X2 [Jatropha curcas]
20 Hb_000117_030 0.1587750226 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]

Gene co-expression network

sample Hb_002596_080 Hb_002596_080 Hb_011310_040 Hb_011310_040 Hb_002596_080--Hb_011310_040 Hb_001493_060 Hb_001493_060 Hb_002596_080--Hb_001493_060 Hb_002157_270 Hb_002157_270 Hb_002596_080--Hb_002157_270 Hb_003226_250 Hb_003226_250 Hb_002596_080--Hb_003226_250 Hb_001195_090 Hb_001195_090 Hb_002596_080--Hb_001195_090 Hb_000445_150 Hb_000445_150 Hb_002596_080--Hb_000445_150 Hb_000139_300 Hb_000139_300 Hb_011310_040--Hb_000139_300 Hb_011310_040--Hb_002157_270 Hb_011310_040--Hb_003226_250 Hb_002164_020 Hb_002164_020 Hb_011310_040--Hb_002164_020 Hb_004306_110 Hb_004306_110 Hb_011310_040--Hb_004306_110 Hb_001493_060--Hb_002164_020 Hb_000347_190 Hb_000347_190 Hb_001493_060--Hb_000347_190 Hb_009079_050 Hb_009079_050 Hb_001493_060--Hb_009079_050 Hb_000580_110 Hb_000580_110 Hb_001493_060--Hb_000580_110 Hb_001493_060--Hb_001195_090 Hb_002129_020 Hb_002129_020 Hb_002157_270--Hb_002129_020 Hb_000950_030 Hb_000950_030 Hb_002157_270--Hb_000950_030 Hb_002157_270--Hb_001493_060 Hb_002157_270--Hb_002164_020 Hb_001369_010 Hb_001369_010 Hb_003226_250--Hb_001369_010 Hb_000808_150 Hb_000808_150 Hb_003226_250--Hb_000808_150 Hb_002759_220 Hb_002759_220 Hb_003226_250--Hb_002759_220 Hb_003462_040 Hb_003462_040 Hb_003226_250--Hb_003462_040 Hb_001195_090--Hb_002129_020 Hb_028639_030 Hb_028639_030 Hb_001195_090--Hb_028639_030 Hb_001216_110 Hb_001216_110 Hb_001195_090--Hb_001216_110 Hb_000684_310 Hb_000684_310 Hb_001195_090--Hb_000684_310 Hb_000417_170 Hb_000417_170 Hb_000445_150--Hb_000417_170 Hb_003994_300 Hb_003994_300 Hb_000445_150--Hb_003994_300 Hb_000445_150--Hb_002157_270 Hb_001584_130 Hb_001584_130 Hb_000445_150--Hb_001584_130 Hb_000445_150--Hb_011310_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.53355 3.04113 4.86444 24.6809 1.17561 2.86272
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.05237 1.81893 2.00955 2.79611 19.671

CAGE analysis