Hb_002597_030

Information

Type -
Description -
Location Contig2597: 57007-57903
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002597_030 0.0 - - -
2 Hb_029576_070 0.0838013441 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
3 Hb_017549_010 0.1024463437 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00222 [Jatropha curcas]
4 Hb_001677_190 0.1098988781 - - ATP-binding cassette transporter, putative [Ricinus communis]
5 Hb_000120_600 0.1186196904 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
6 Hb_001856_130 0.1188730653 - - hypothetical protein CISIN_1g022795mg [Citrus sinensis]
7 Hb_036029_020 0.1218700298 - - PREDICTED: patellin-3-like [Jatropha curcas]
8 Hb_000010_220 0.1254397945 - - PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]
9 Hb_011355_020 0.1306140005 - - extensin, proline-rich protein, putative [Ricinus communis]
10 Hb_004374_170 0.1324361818 - - PREDICTED: gibberellin 20 oxidase 1-B [Jatropha curcas]
11 Hb_000139_050 0.1326178653 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
12 Hb_030827_080 0.1334641406 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
13 Hb_002739_160 0.1369365693 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
14 Hb_001675_350 0.1414776306 - - Avr9/Cf-9 rapidly elicited protein [Jatropha curcas]
15 Hb_002804_070 0.1430000905 - - hypothetical protein JCGZ_05701 [Jatropha curcas]
16 Hb_150573_010 0.1452349104 transcription factor TF Family: LIM Cysteine and glycine-rich protein, putative [Ricinus communis]
17 Hb_001675_290 0.1456378395 - - PREDICTED: transcription factor bHLH68-like isoform X1 [Jatropha curcas]
18 Hb_001663_090 0.1479817484 - - ribonuclease t2, putative [Ricinus communis]
19 Hb_008352_020 0.1481141713 - - hypothetical protein [Cecembia lonarensis]
20 Hb_006026_020 0.1485156175 - - PREDICTED: BTB/POZ domain-containing protein At5g48800 [Jatropha curcas]

Gene co-expression network

sample Hb_002597_030 Hb_002597_030 Hb_029576_070 Hb_029576_070 Hb_002597_030--Hb_029576_070 Hb_017549_010 Hb_017549_010 Hb_002597_030--Hb_017549_010 Hb_001677_190 Hb_001677_190 Hb_002597_030--Hb_001677_190 Hb_000120_600 Hb_000120_600 Hb_002597_030--Hb_000120_600 Hb_001856_130 Hb_001856_130 Hb_002597_030--Hb_001856_130 Hb_036029_020 Hb_036029_020 Hb_002597_030--Hb_036029_020 Hb_029576_070--Hb_017549_010 Hb_029576_070--Hb_000120_600 Hb_029576_070--Hb_001856_130 Hb_029576_070--Hb_001677_190 Hb_011355_020 Hb_011355_020 Hb_029576_070--Hb_011355_020 Hb_001115_100 Hb_001115_100 Hb_017549_010--Hb_001115_100 Hb_017549_010--Hb_000120_600 Hb_004374_170 Hb_004374_170 Hb_017549_010--Hb_004374_170 Hb_002804_070 Hb_002804_070 Hb_017549_010--Hb_002804_070 Hb_001677_190--Hb_001856_130 Hb_001677_190--Hb_000120_600 Hb_001677_190--Hb_011355_020 Hb_001677_190--Hb_036029_020 Hb_000120_600--Hb_001856_130 Hb_000120_600--Hb_002804_070 Hb_001953_010 Hb_001953_010 Hb_000120_600--Hb_001953_010 Hb_000120_600--Hb_004374_170 Hb_004474_070 Hb_004474_070 Hb_000120_600--Hb_004474_070 Hb_153180_010 Hb_153180_010 Hb_001856_130--Hb_153180_010 Hb_001417_090 Hb_001417_090 Hb_001856_130--Hb_001417_090 Hb_120040_010 Hb_120040_010 Hb_001856_130--Hb_120040_010 Hb_001856_130--Hb_001953_010 Hb_000000_320 Hb_000000_320 Hb_001856_130--Hb_000000_320 Hb_071433_010 Hb_071433_010 Hb_036029_020--Hb_071433_010 Hb_001675_290 Hb_001675_290 Hb_036029_020--Hb_001675_290 Hb_007749_020 Hb_007749_020 Hb_036029_020--Hb_007749_020 Hb_000172_230 Hb_000172_230 Hb_036029_020--Hb_000172_230 Hb_004970_100 Hb_004970_100 Hb_036029_020--Hb_004970_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0599295 0.931697 0.854171 2.33776 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.109819 0.108685

CAGE analysis