Hb_002600_070

Information

Type transcription factor
Description TF Family: TAZ
Location Contig2600: 72671-83162
Sequence    

Annotation

kegg
ID rcu:RCOM_0597450
description hypothetical protein
nr
ID XP_012077923.1
description PREDICTED: histone acetyltransferase HAC12 [Jatropha curcas]
swissprot
ID Q9C5X9
description Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 PE=1 SV=2
trembl
ID B9SJ01
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0597450 PE=4 SV=1
Gene Ontology
ID GO:0003712
description histone acetyltransferase hac12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27088: 72756-73366 , PASA_asmbl_27089: 73373-75826 , PASA_asmbl_27090: 76100-78294 , PASA_asmbl_27091: 78296-79531 , PASA_asmbl_27092: 80339-81667
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002600_070 0.0 transcription factor TF Family: TAZ PREDICTED: histone acetyltransferase HAC12 [Jatropha curcas]
2 Hb_000748_090 0.051511224 - - glucose inhibited division protein A, putative [Ricinus communis]
3 Hb_007012_030 0.057498312 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isoform X1 [Jatropha curcas]
4 Hb_000771_170 0.0610884907 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial [Jatropha curcas]
5 Hb_001277_340 0.0711752829 - - aldo/keto reductase, putative [Ricinus communis]
6 Hb_000482_050 0.0733781307 - - PREDICTED: UDP-sulfoquinovose synthase, chloroplastic [Jatropha curcas]
7 Hb_009158_060 0.0777995491 - - PREDICTED: CDPK-related kinase 3 [Jatropha curcas]
8 Hb_001396_020 0.0778663784 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
9 Hb_005305_130 0.0780624567 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
10 Hb_000878_160 0.0812778214 - - PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial [Jatropha curcas]
11 Hb_000562_070 0.0821820165 - - PREDICTED: uncharacterized protein LOC105635371 isoform X1 [Jatropha curcas]
12 Hb_002973_110 0.0822880496 - - ABC transporter family protein [Hevea brasiliensis]
13 Hb_068804_090 0.0857548029 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
14 Hb_003462_060 0.0861399014 - - PREDICTED: ABC transporter G family member 24-like [Jatropha curcas]
15 Hb_008642_060 0.0866000161 - - PREDICTED: dynamin-related protein 1E isoform X2 [Jatropha curcas]
16 Hb_003529_140 0.086693412 - - PREDICTED: nifU-like protein 2, chloroplastic [Jatropha curcas]
17 Hb_002249_030 0.0875717596 - - PREDICTED: chaperone protein ClpC, chloroplastic [Jatropha curcas]
18 Hb_004324_360 0.0876921361 - - PREDICTED: uncharacterized protein LOC105650600 isoform X1 [Jatropha curcas]
19 Hb_001828_120 0.0888154907 - - PREDICTED: uncharacterized protein LOC105140167 [Populus euphratica]
20 Hb_001472_160 0.0896170426 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]

Gene co-expression network

sample Hb_002600_070 Hb_002600_070 Hb_000748_090 Hb_000748_090 Hb_002600_070--Hb_000748_090 Hb_007012_030 Hb_007012_030 Hb_002600_070--Hb_007012_030 Hb_000771_170 Hb_000771_170 Hb_002600_070--Hb_000771_170 Hb_001277_340 Hb_001277_340 Hb_002600_070--Hb_001277_340 Hb_000482_050 Hb_000482_050 Hb_002600_070--Hb_000482_050 Hb_009158_060 Hb_009158_060 Hb_002600_070--Hb_009158_060 Hb_000748_090--Hb_007012_030 Hb_068804_090 Hb_068804_090 Hb_000748_090--Hb_068804_090 Hb_004324_360 Hb_004324_360 Hb_000748_090--Hb_004324_360 Hb_021596_020 Hb_021596_020 Hb_000748_090--Hb_021596_020 Hb_000748_090--Hb_000482_050 Hb_007012_030--Hb_068804_090 Hb_000617_250 Hb_000617_250 Hb_007012_030--Hb_000617_250 Hb_007012_030--Hb_000482_050 Hb_007012_030--Hb_004324_360 Hb_004225_040 Hb_004225_040 Hb_000771_170--Hb_004225_040 Hb_000562_070 Hb_000562_070 Hb_000771_170--Hb_000562_070 Hb_001472_160 Hb_001472_160 Hb_000771_170--Hb_001472_160 Hb_004884_180 Hb_004884_180 Hb_000771_170--Hb_004884_180 Hb_000771_170--Hb_000482_050 Hb_001277_340--Hb_000562_070 Hb_001277_340--Hb_009158_060 Hb_005305_130 Hb_005305_130 Hb_001277_340--Hb_005305_130 Hb_000155_170 Hb_000155_170 Hb_001277_340--Hb_000155_170 Hb_003925_060 Hb_003925_060 Hb_001277_340--Hb_003925_060 Hb_002828_060 Hb_002828_060 Hb_000482_050--Hb_002828_060 Hb_004629_030 Hb_004629_030 Hb_000482_050--Hb_004629_030 Hb_001396_020 Hb_001396_020 Hb_000482_050--Hb_001396_020 Hb_009158_060--Hb_005305_130 Hb_160608_010 Hb_160608_010 Hb_009158_060--Hb_160608_010 Hb_003661_010 Hb_003661_010 Hb_009158_060--Hb_003661_010 Hb_000172_360 Hb_000172_360 Hb_009158_060--Hb_000172_360 Hb_000030_140 Hb_000030_140 Hb_009158_060--Hb_000030_140 Hb_008054_040 Hb_008054_040 Hb_009158_060--Hb_008054_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.81497 3.70815 5.01736 2.89509 2.01855 2.12926
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.32148 1.26505 1.28325 2.11717 6.11084

CAGE analysis