Hb_002600_100

Information

Type -
Description -
Location Contig2600: 115519-117726
Sequence    

Annotation

kegg
ID tcc:TCM_019610
description Glycosyl hydrolase family 81 protein
nr
ID XP_012088145.1
description PREDICTED: putative endo-1,3(4)-beta-glucanase 2 [Jatropha curcas]
swissprot
ID Q09850
description Putative endo-1,3(4)-beta-glucanase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=eng2 PE=3 SV=1
trembl
ID A0A067JKF3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25658 PE=4 SV=1
Gene Ontology
ID GO:0052861
description endo- -beta-glucanase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002600_100 0.0 - - PREDICTED: putative endo-1,3(4)-beta-glucanase 2 [Jatropha curcas]
2 Hb_020419_010 0.1000184916 - - PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
3 Hb_000487_310 0.108230395 - - PREDICTED: uncharacterized protein LOC105646211 isoform X1 [Jatropha curcas]
4 Hb_014720_080 0.1111576273 - - iron-sulfur cluster scaffold protein [Hevea brasiliensis]
5 Hb_004738_010 0.1141672426 - - PREDICTED: N-acetyl-D-glucosamine kinase-like [Jatropha curcas]
6 Hb_002540_030 0.1186258932 - - hypothetical protein 32 [Hevea brasiliensis]
7 Hb_002119_120 0.1199142487 - - PREDICTED: anthranilate synthase beta subunit 1, chloroplastic-like [Jatropha curcas]
8 Hb_000333_090 0.120650913 - - PREDICTED: uncharacterized protein LOC102617374 isoform X1 [Citrus sinensis]
9 Hb_000496_060 0.1214000177 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH3 [Jatropha curcas]
10 Hb_002027_210 0.1214680082 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
11 Hb_000922_270 0.1222749286 - - iron-sulfur cluster scaffold protein [Hevea brasiliensis]
12 Hb_001616_060 0.1224450654 - - PREDICTED: DNA-directed RNA polymerase subunit 10-like protein [Jatropha curcas]
13 Hb_001711_030 0.1226304898 - - PREDICTED: uncharacterized protein LOC105642409 [Jatropha curcas]
14 Hb_001437_220 0.1233981885 - - Transmembrane protein, putative [Ricinus communis]
15 Hb_005432_030 0.1235718845 - - PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Gossypium raimondii]
16 Hb_009404_020 0.1249821391 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001329_210 0.1263688452 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
18 Hb_000025_120 0.1268729249 - - PREDICTED: uncharacterized protein LOC105628946 isoform X1 [Jatropha curcas]
19 Hb_003893_090 0.127108799 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
20 Hb_002411_200 0.1272079075 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002600_100 Hb_002600_100 Hb_020419_010 Hb_020419_010 Hb_002600_100--Hb_020419_010 Hb_000487_310 Hb_000487_310 Hb_002600_100--Hb_000487_310 Hb_014720_080 Hb_014720_080 Hb_002600_100--Hb_014720_080 Hb_004738_010 Hb_004738_010 Hb_002600_100--Hb_004738_010 Hb_002540_030 Hb_002540_030 Hb_002600_100--Hb_002540_030 Hb_002119_120 Hb_002119_120 Hb_002600_100--Hb_002119_120 Hb_004678_050 Hb_004678_050 Hb_020419_010--Hb_004678_050 Hb_020419_010--Hb_014720_080 Hb_000496_060 Hb_000496_060 Hb_020419_010--Hb_000496_060 Hb_002411_200 Hb_002411_200 Hb_020419_010--Hb_002411_200 Hb_000025_120 Hb_000025_120 Hb_020419_010--Hb_000025_120 Hb_009404_020 Hb_009404_020 Hb_000487_310--Hb_009404_020 Hb_000487_310--Hb_002119_120 Hb_001711_030 Hb_001711_030 Hb_000487_310--Hb_001711_030 Hb_004108_230 Hb_004108_230 Hb_000487_310--Hb_004108_230 Hb_005432_030 Hb_005432_030 Hb_000487_310--Hb_005432_030 Hb_003777_180 Hb_003777_180 Hb_000487_310--Hb_003777_180 Hb_001722_100 Hb_001722_100 Hb_014720_080--Hb_001722_100 Hb_014720_080--Hb_000025_120 Hb_021650_030 Hb_021650_030 Hb_014720_080--Hb_021650_030 Hb_014720_080--Hb_002540_030 Hb_000146_020 Hb_000146_020 Hb_014720_080--Hb_000146_020 Hb_000834_270 Hb_000834_270 Hb_014720_080--Hb_000834_270 Hb_004738_010--Hb_002119_120 Hb_001863_480 Hb_001863_480 Hb_004738_010--Hb_001863_480 Hb_000907_090 Hb_000907_090 Hb_004738_010--Hb_000907_090 Hb_001439_170 Hb_001439_170 Hb_004738_010--Hb_001439_170 Hb_004738_010--Hb_001711_030 Hb_000032_040 Hb_000032_040 Hb_004738_010--Hb_000032_040 Hb_010172_070 Hb_010172_070 Hb_002540_030--Hb_010172_070 Hb_000922_270 Hb_000922_270 Hb_002540_030--Hb_000922_270 Hb_007666_020 Hb_007666_020 Hb_002540_030--Hb_007666_020 Hb_003893_090 Hb_003893_090 Hb_002540_030--Hb_003893_090 Hb_001538_100 Hb_001538_100 Hb_002540_030--Hb_001538_100 Hb_002119_120--Hb_001439_170 Hb_002119_120--Hb_001863_480 Hb_002119_120--Hb_001711_030 Hb_001437_220 Hb_001437_220 Hb_002119_120--Hb_001437_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.6289 3.99429 0.512679 3.22386 4.5124 7.22677
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
25.1711 18.0388 15.4366 3.99332 4.15003

CAGE analysis