Hb_002601_120

Information

Type -
Description -
Location Contig2601: 101400-107082
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa002593mg
description hypothetical protein
nr
ID XP_012073269.1
description PREDICTED: uncharacterized protein LOC105634921 [Jatropha curcas]
swissprot
ID P34913
description Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2
trembl
ID A0A067KQ90
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06209 PE=4 SV=1
Gene Ontology
ID GO:0016787
description hydrolase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27115: 101618-106744 , PASA_asmbl_27116: 101618-104292
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002601_120 0.0 - - PREDICTED: uncharacterized protein LOC105634921 [Jatropha curcas]
2 Hb_004204_080 0.0750428666 - - diacylglycerol kinase, theta, putative [Ricinus communis]
3 Hb_008643_060 0.0864423147 - - unnamed protein product [Coffea canephora]
4 Hb_001019_170 0.0869517871 - - PREDICTED: uncharacterized protein LOC105639322 [Jatropha curcas]
5 Hb_008714_020 0.0876431863 - - PREDICTED: GTP-binding protein SAR1A-like [Jatropha curcas]
6 Hb_002200_130 0.0883283155 - - PREDICTED: vacuolar protein sorting-associated protein 45 homolog [Jatropha curcas]
7 Hb_000046_450 0.089934699 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
8 Hb_022408_010 0.0910331469 - - PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3 [Jatropha curcas]
9 Hb_002928_060 0.092636446 - - PREDICTED: pre-rRNA-processing protein TSR1 homolog [Jatropha curcas]
10 Hb_002701_080 0.0947513327 - - PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Jatropha curcas]
11 Hb_002341_030 0.0958385509 - - PREDICTED: transcription factor bHLH140 [Jatropha curcas]
12 Hb_001575_080 0.0974112196 - - PREDICTED: villin-4-like [Jatropha curcas]
13 Hb_000207_390 0.097989393 - - PREDICTED: uncharacterized protein LOC105637143 [Jatropha curcas]
14 Hb_000283_070 0.0992875194 - - PREDICTED: T-complex protein 1 subunit delta [Jatropha curcas]
15 Hb_004055_040 0.0996599115 - - Phospholipid-transporting ATPase, putative [Ricinus communis]
16 Hb_175338_020 0.1003087338 - - PREDICTED: uncharacterized protein LOC105648065 [Jatropha curcas]
17 Hb_003362_040 0.1003116086 - - PREDICTED: probable methionine--tRNA ligase [Jatropha curcas]
18 Hb_003018_160 0.1003761518 - - PREDICTED: uncharacterized protein LOC105628876 [Jatropha curcas]
19 Hb_010080_060 0.1009984292 - - receptor protein kinase, putative [Ricinus communis]
20 Hb_000270_780 0.1016925569 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Jatropha curcas]

Gene co-expression network

sample Hb_002601_120 Hb_002601_120 Hb_004204_080 Hb_004204_080 Hb_002601_120--Hb_004204_080 Hb_008643_060 Hb_008643_060 Hb_002601_120--Hb_008643_060 Hb_001019_170 Hb_001019_170 Hb_002601_120--Hb_001019_170 Hb_008714_020 Hb_008714_020 Hb_002601_120--Hb_008714_020 Hb_002200_130 Hb_002200_130 Hb_002601_120--Hb_002200_130 Hb_000046_450 Hb_000046_450 Hb_002601_120--Hb_000046_450 Hb_001797_050 Hb_001797_050 Hb_004204_080--Hb_001797_050 Hb_005730_030 Hb_005730_030 Hb_004204_080--Hb_005730_030 Hb_005532_050 Hb_005532_050 Hb_004204_080--Hb_005532_050 Hb_000031_050 Hb_000031_050 Hb_004204_080--Hb_000031_050 Hb_022408_010 Hb_022408_010 Hb_004204_080--Hb_022408_010 Hb_001541_020 Hb_001541_020 Hb_004204_080--Hb_001541_020 Hb_008643_060--Hb_004204_080 Hb_000270_780 Hb_000270_780 Hb_008643_060--Hb_000270_780 Hb_001575_080 Hb_001575_080 Hb_008643_060--Hb_001575_080 Hb_002890_030 Hb_002890_030 Hb_008643_060--Hb_002890_030 Hb_000861_070 Hb_000861_070 Hb_008643_060--Hb_000861_070 Hb_001019_170--Hb_008714_020 Hb_008695_120 Hb_008695_120 Hb_001019_170--Hb_008695_120 Hb_003581_120 Hb_003581_120 Hb_001019_170--Hb_003581_120 Hb_002400_180 Hb_002400_180 Hb_001019_170--Hb_002400_180 Hb_000076_080 Hb_000076_080 Hb_001019_170--Hb_000076_080 Hb_006913_040 Hb_006913_040 Hb_001019_170--Hb_006913_040 Hb_010180_040 Hb_010180_040 Hb_008714_020--Hb_010180_040 Hb_001040_160 Hb_001040_160 Hb_008714_020--Hb_001040_160 Hb_027028_020 Hb_027028_020 Hb_008714_020--Hb_027028_020 Hb_000699_250 Hb_000699_250 Hb_008714_020--Hb_000699_250 Hb_008714_020--Hb_000046_450 Hb_000207_390 Hb_000207_390 Hb_002200_130--Hb_000207_390 Hb_003362_040 Hb_003362_040 Hb_002200_130--Hb_003362_040 Hb_001301_200 Hb_001301_200 Hb_002200_130--Hb_001301_200 Hb_000048_140 Hb_000048_140 Hb_002200_130--Hb_000048_140 Hb_028639_010 Hb_028639_010 Hb_002200_130--Hb_028639_010 Hb_002200_130--Hb_001797_050 Hb_000046_450--Hb_000699_250 Hb_006816_300 Hb_006816_300 Hb_000046_450--Hb_006816_300 Hb_025477_060 Hb_025477_060 Hb_000046_450--Hb_025477_060 Hb_000046_450--Hb_001019_170 Hb_007849_020 Hb_007849_020 Hb_000046_450--Hb_007849_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.9366 27.9091 8.45828 15.3967 42.2139 48.6734
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.2199 10.8131 26.7634 15.6379 5.67328

CAGE analysis