Hb_002603_040

Information

Type -
Description -
Location Contig2603: 12855-28975
Sequence    

Annotation

kegg
ID rcu:RCOM_0339640
description 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative (EC:3.1.4.11)
nr
ID XP_012087478.1
description PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
swissprot
ID Q39033
description Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana GN=PLC2 PE=1 SV=1
trembl
ID A0A067L8K5
description Phosphoinositide phospholipase C OS=Jatropha curcas GN=JCGZ_01271 PE=4 SV=1
Gene Ontology
ID GO:0005622
description phosphoinositide-specific phospholipase c family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27123: 13849-20712 , PASA_asmbl_27124: 15789-15923 , PASA_asmbl_27126: 17233-17565
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002603_040 0.0 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
2 Hb_000265_140 0.0792851806 - - PREDICTED: transmembrane 9 superfamily member 12 [Jatropha curcas]
3 Hb_000599_360 0.0981569222 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
4 Hb_002400_060 0.1000681295 - - PREDICTED: putative clathrin assembly protein At2g25430 [Jatropha curcas]
5 Hb_000085_260 0.1053107603 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
6 Hb_001754_020 0.1063833229 - - PREDICTED: kinesin-13A isoform X1 [Jatropha curcas]
7 Hb_000494_030 0.1063964014 - - PREDICTED: uncharacterized protein LOC105643196 [Jatropha curcas]
8 Hb_001511_180 0.107525154 - - Clathrin heavy chain 2 -like protein [Gossypium arboreum]
9 Hb_021576_070 0.1082707354 - - hypothetical protein PRUPE_ppa002736mg [Prunus persica]
10 Hb_033642_060 0.1090963489 - - PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]
11 Hb_015884_020 0.1131490033 - - PREDICTED: protein PIR [Jatropha curcas]
12 Hb_010381_020 0.1135800191 - - Endosomal P24A protein precursor, putative [Ricinus communis]
13 Hb_183086_030 0.1156203823 - - GTPase-activating protein GYP7 [Gossypium arboreum]
14 Hb_000701_030 0.1157294089 - - Sodium/hydrogen exchanger 6 -like protein [Gossypium arboreum]
15 Hb_002311_130 0.116076476 - - PREDICTED: importin subunit alpha-2 isoform X2 [Jatropha curcas]
16 Hb_001159_030 0.1164544235 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
17 Hb_009476_120 0.1181764865 - - Clathrin heavy chain 1 [Glycine soja]
18 Hb_005741_040 0.118219401 - - PREDICTED: probable receptor-like protein kinase At1g49730 [Jatropha curcas]
19 Hb_021977_010 0.1182651878 - - PREDICTED: leukotriene A-4 hydrolase homolog [Jatropha curcas]
20 Hb_000479_110 0.1184411153 - - PREDICTED: BAG family molecular chaperone regulator 8, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_002603_040 Hb_002603_040 Hb_000265_140 Hb_000265_140 Hb_002603_040--Hb_000265_140 Hb_000599_360 Hb_000599_360 Hb_002603_040--Hb_000599_360 Hb_002400_060 Hb_002400_060 Hb_002603_040--Hb_002400_060 Hb_000085_260 Hb_000085_260 Hb_002603_040--Hb_000085_260 Hb_001754_020 Hb_001754_020 Hb_002603_040--Hb_001754_020 Hb_000494_030 Hb_000494_030 Hb_002603_040--Hb_000494_030 Hb_000701_030 Hb_000701_030 Hb_000265_140--Hb_000701_030 Hb_012194_060 Hb_012194_060 Hb_000265_140--Hb_012194_060 Hb_000265_140--Hb_000085_260 Hb_000265_140--Hb_001754_020 Hb_021576_070 Hb_021576_070 Hb_000265_140--Hb_021576_070 Hb_158845_060 Hb_158845_060 Hb_000599_360--Hb_158845_060 Hb_021977_010 Hb_021977_010 Hb_000599_360--Hb_021977_010 Hb_003964_110 Hb_003964_110 Hb_000599_360--Hb_003964_110 Hb_160608_010 Hb_160608_010 Hb_000599_360--Hb_160608_010 Hb_005741_040 Hb_005741_040 Hb_000599_360--Hb_005741_040 Hb_080147_050 Hb_080147_050 Hb_000599_360--Hb_080147_050 Hb_001801_020 Hb_001801_020 Hb_002400_060--Hb_001801_020 Hb_002311_130 Hb_002311_130 Hb_002400_060--Hb_002311_130 Hb_001210_040 Hb_001210_040 Hb_002400_060--Hb_001210_040 Hb_009674_050 Hb_009674_050 Hb_002400_060--Hb_009674_050 Hb_033642_060 Hb_033642_060 Hb_002400_060--Hb_033642_060 Hb_002400_060--Hb_000265_140 Hb_001159_030 Hb_001159_030 Hb_000085_260--Hb_001159_030 Hb_010042_030 Hb_010042_030 Hb_000085_260--Hb_010042_030 Hb_005062_110 Hb_005062_110 Hb_000085_260--Hb_005062_110 Hb_000098_050 Hb_000098_050 Hb_000085_260--Hb_000098_050 Hb_000503_020 Hb_000503_020 Hb_000085_260--Hb_000503_020 Hb_000679_100 Hb_000679_100 Hb_000085_260--Hb_000679_100 Hb_003975_010 Hb_003975_010 Hb_001754_020--Hb_003975_010 Hb_001754_020--Hb_021576_070 Hb_001691_040 Hb_001691_040 Hb_001754_020--Hb_001691_040 Hb_010672_020 Hb_010672_020 Hb_001754_020--Hb_010672_020 Hb_002272_240 Hb_002272_240 Hb_001754_020--Hb_002272_240 Hb_116349_120 Hb_116349_120 Hb_001754_020--Hb_116349_120 Hb_000494_030--Hb_000701_030 Hb_000683_050 Hb_000683_050 Hb_000494_030--Hb_000683_050 Hb_004030_060 Hb_004030_060 Hb_000494_030--Hb_004030_060 Hb_010390_010 Hb_010390_010 Hb_000494_030--Hb_010390_010 Hb_000494_030--Hb_021576_070 Hb_007416_070 Hb_007416_070 Hb_000494_030--Hb_007416_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.5815 25.3957 25.0803 49.0822 12.5795 11.9412
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.79266 2.83521 19.4833 26.263 34.7078

CAGE analysis