Hb_002609_020

Information

Type -
Description -
Location Contig2609: 23636-26546
Sequence    

Annotation

kegg
ID rcu:RCOM_0730400
description phosphatidylinositol n-acetylglucosaminyltransferase subunit p, putative (EC:2.4.1.198)
nr
ID XP_012068104.1
description PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like [Jatropha curcas]
swissprot
ID O64792
description Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Arabidopsis thaliana GN=At1g61280 PE=2 SV=1
trembl
ID A0A067LNU0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08507 PE=4 SV=1
Gene Ontology
ID GO:0017176
description phosphatidylinositol n-acetylglucosaminyltransferase subunit p-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27174: 23654-23926 , PASA_asmbl_27175: 23607-23859 , PASA_asmbl_27176: 25043-26431
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002609_020 0.0 - - PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like [Jatropha curcas]
2 Hb_004735_040 0.0569930299 - - PREDICTED: GTP-binding nuclear protein Ran1A-like [Jatropha curcas]
3 Hb_001821_010 0.0599768148 - - PREDICTED: uncharacterized protein C9orf78 [Jatropha curcas]
4 Hb_009838_080 0.0662797337 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]
5 Hb_000056_200 0.0701908346 - - 40S ribosomal S9-2 -like protein [Gossypium arboreum]
6 Hb_000243_030 0.0738170288 - - PREDICTED: probable dimethyladenosine transferase [Jatropha curcas]
7 Hb_002226_070 0.073921629 - - PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Jatropha curcas]
8 Hb_000920_180 0.0744006948 - - PREDICTED: F-box protein SKIP5 [Jatropha curcas]
9 Hb_001105_030 0.0762390315 - - PREDICTED: probable caffeoyl-CoA O-methyltransferase At4g26220 [Jatropha curcas]
10 Hb_006031_020 0.0765488678 - - PREDICTED: protein FLX-like 1 isoform X1 [Jatropha curcas]
11 Hb_000777_040 0.0773020376 - - PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
12 Hb_000059_370 0.0776412274 - - PREDICTED: U6 snRNA phosphodiesterase [Jatropha curcas]
13 Hb_000504_140 0.0780538458 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 26, chloroplastic-like [Jatropha curcas]
14 Hb_005779_060 0.078455368 - - PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
15 Hb_001489_060 0.0785275841 - - PREDICTED: uncharacterized protein LOC105649778 isoform X2 [Jatropha curcas]
16 Hb_003929_250 0.0787232668 - - PREDICTED: proteasome assembly chaperone 4 [Jatropha curcas]
17 Hb_000580_090 0.079184792 - - PREDICTED: tRNA 2'-phosphotransferase 1 isoform X1 [Jatropha curcas]
18 Hb_002044_080 0.0796919463 - - PREDICTED: secretion-regulating guanine nucleotide exchange factor isoform X2 [Jatropha curcas]
19 Hb_153112_020 0.0806152907 - - PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like [Jatropha curcas]
20 Hb_000120_790 0.0809608529 - - PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002609_020 Hb_002609_020 Hb_004735_040 Hb_004735_040 Hb_002609_020--Hb_004735_040 Hb_001821_010 Hb_001821_010 Hb_002609_020--Hb_001821_010 Hb_009838_080 Hb_009838_080 Hb_002609_020--Hb_009838_080 Hb_000056_200 Hb_000056_200 Hb_002609_020--Hb_000056_200 Hb_000243_030 Hb_000243_030 Hb_002609_020--Hb_000243_030 Hb_002226_070 Hb_002226_070 Hb_002609_020--Hb_002226_070 Hb_004735_040--Hb_001821_010 Hb_001105_030 Hb_001105_030 Hb_004735_040--Hb_001105_030 Hb_001489_060 Hb_001489_060 Hb_004735_040--Hb_001489_060 Hb_001195_280 Hb_001195_280 Hb_004735_040--Hb_001195_280 Hb_000302_010 Hb_000302_010 Hb_004735_040--Hb_000302_010 Hb_000815_320 Hb_000815_320 Hb_001821_010--Hb_000815_320 Hb_001821_010--Hb_001105_030 Hb_001821_010--Hb_000056_200 Hb_012725_050 Hb_012725_050 Hb_001821_010--Hb_012725_050 Hb_002214_040 Hb_002214_040 Hb_009838_080--Hb_002214_040 Hb_000107_620 Hb_000107_620 Hb_009838_080--Hb_000107_620 Hb_004254_120 Hb_004254_120 Hb_009838_080--Hb_004254_120 Hb_002477_070 Hb_002477_070 Hb_009838_080--Hb_002477_070 Hb_153112_020 Hb_153112_020 Hb_009838_080--Hb_153112_020 Hb_000920_180 Hb_000920_180 Hb_000056_200--Hb_000920_180 Hb_003050_080 Hb_003050_080 Hb_000056_200--Hb_003050_080 Hb_000056_200--Hb_000243_030 Hb_063716_050 Hb_063716_050 Hb_000056_200--Hb_063716_050 Hb_002044_080 Hb_002044_080 Hb_000056_200--Hb_002044_080 Hb_000243_030--Hb_063716_050 Hb_006541_030 Hb_006541_030 Hb_000243_030--Hb_006541_030 Hb_000398_180 Hb_000398_180 Hb_000243_030--Hb_000398_180 Hb_000243_030--Hb_002226_070 Hb_004440_090 Hb_004440_090 Hb_000243_030--Hb_004440_090 Hb_004032_010 Hb_004032_010 Hb_002226_070--Hb_004032_010 Hb_033834_040 Hb_033834_040 Hb_002226_070--Hb_033834_040 Hb_002226_070--Hb_001489_060 Hb_000926_250 Hb_000926_250 Hb_002226_070--Hb_000926_250 Hb_002226_070--Hb_000056_200 Hb_000059_370 Hb_000059_370 Hb_002226_070--Hb_000059_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.80827 5.32168 7.27283 5.00381 12.3755 11.3561
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.0981 16.1444 13.5607 6.11112 5.53721

CAGE analysis