Hb_002609_130

Information

Type -
Description -
Location Contig2609: 110391-111926
Sequence    

Annotation

kegg
ID rcu:RCOM_0611520
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012067915.1
description PREDICTED: cytochrome P450 86A1 [Jatropha curcas]
swissprot
ID P48422
description Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2
trembl
ID A0A067LDN5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08494 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 86a1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27192: 110422-111051 , PASA_asmbl_27194: 111496-111686
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002609_130 0.0 - - PREDICTED: cytochrome P450 86A1 [Jatropha curcas]
2 Hb_004605_020 0.1221081196 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Jatropha curcas]
3 Hb_005155_010 0.1339094826 - - amino acid transporter, putative [Ricinus communis]
4 Hb_000847_010 0.1390680465 - - PREDICTED: uncharacterized protein LOC102608064 [Citrus sinensis]
5 Hb_000816_160 0.1395919977 - - PREDICTED: peroxidase 4-like [Jatropha curcas]
6 Hb_010261_030 0.1402757589 - - polyprotein [Citrus endogenous pararetrovirus]
7 Hb_005271_180 0.1416553902 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
8 Hb_002217_070 0.1532274763 - - PREDICTED: uncharacterized protein LOC105643596 [Jatropha curcas]
9 Hb_004767_060 0.1570080522 - - PREDICTED: uncharacterized protein LOC105761928 [Gossypium raimondii]
10 Hb_005306_020 0.1572826752 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
11 Hb_000614_190 0.1577608476 desease resistance Gene Name: ABC_membrane PREDICTED: putative ABC transporter C family member 15 [Jatropha curcas]
12 Hb_002000_130 0.1577699544 - - PREDICTED: abscisic stress-ripening protein 2-like [Eucalyptus grandis]
13 Hb_003517_090 0.1589388486 - - PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform X2 [Jatropha curcas]
14 Hb_042463_060 0.1603661541 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001357_360 0.1604543838 - - zinc finger protein, putative [Ricinus communis]
16 Hb_004143_140 0.160931159 - - glycosyltransferase, partial [Arabidopsis thaliana]
17 Hb_004007_230 0.1620186712 - - PREDICTED: putative formamidase C869.04 isoform X1 [Jatropha curcas]
18 Hb_061908_020 0.1624258642 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
19 Hb_003177_090 0.1633945674 - - PREDICTED: filament-like plant protein 4 [Jatropha curcas]
20 Hb_004306_140 0.1638609103 - - calcineurin-like phosphoesterase [Manihot esculenta]

Gene co-expression network

sample Hb_002609_130 Hb_002609_130 Hb_004605_020 Hb_004605_020 Hb_002609_130--Hb_004605_020 Hb_005155_010 Hb_005155_010 Hb_002609_130--Hb_005155_010 Hb_000847_010 Hb_000847_010 Hb_002609_130--Hb_000847_010 Hb_000816_160 Hb_000816_160 Hb_002609_130--Hb_000816_160 Hb_010261_030 Hb_010261_030 Hb_002609_130--Hb_010261_030 Hb_005271_180 Hb_005271_180 Hb_002609_130--Hb_005271_180 Hb_061908_020 Hb_061908_020 Hb_004605_020--Hb_061908_020 Hb_027337_030 Hb_027337_030 Hb_004605_020--Hb_027337_030 Hb_002217_070 Hb_002217_070 Hb_004605_020--Hb_002217_070 Hb_006618_020 Hb_006618_020 Hb_004605_020--Hb_006618_020 Hb_062229_010 Hb_062229_010 Hb_004605_020--Hb_062229_010 Hb_005155_010--Hb_061908_020 Hb_005155_010--Hb_004605_020 Hb_042463_060 Hb_042463_060 Hb_005155_010--Hb_042463_060 Hb_000321_120 Hb_000321_120 Hb_005155_010--Hb_000321_120 Hb_005155_010--Hb_010261_030 Hb_004126_030 Hb_004126_030 Hb_000847_010--Hb_004126_030 Hb_000847_010--Hb_002217_070 Hb_000800_010 Hb_000800_010 Hb_000847_010--Hb_000800_010 Hb_005305_030 Hb_005305_030 Hb_000847_010--Hb_005305_030 Hb_013405_100 Hb_013405_100 Hb_000847_010--Hb_013405_100 Hb_002344_080 Hb_002344_080 Hb_000816_160--Hb_002344_080 Hb_001689_030 Hb_001689_030 Hb_000816_160--Hb_001689_030 Hb_000363_050 Hb_000363_050 Hb_000816_160--Hb_000363_050 Hb_003077_140 Hb_003077_140 Hb_000816_160--Hb_003077_140 Hb_003007_030 Hb_003007_030 Hb_000816_160--Hb_003007_030 Hb_000816_160--Hb_004605_020 Hb_117840_010 Hb_117840_010 Hb_010261_030--Hb_117840_010 Hb_010261_030--Hb_062229_010 Hb_002218_070 Hb_002218_070 Hb_010261_030--Hb_002218_070 Hb_001971_020 Hb_001971_020 Hb_010261_030--Hb_001971_020 Hb_007007_090 Hb_007007_090 Hb_005271_180--Hb_007007_090 Hb_004143_140 Hb_004143_140 Hb_005271_180--Hb_004143_140 Hb_005074_010 Hb_005074_010 Hb_005271_180--Hb_005074_010 Hb_001046_040 Hb_001046_040 Hb_005271_180--Hb_001046_040 Hb_044624_010 Hb_044624_010 Hb_005271_180--Hb_044624_010 Hb_000363_250 Hb_000363_250 Hb_005271_180--Hb_000363_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.239419 8.75932 1.63567 4.94886 0.435039 0.100053
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0717253 0.314716 3.35816 6.759

CAGE analysis