Hb_002609_230

Information

Type -
Description -
Location Contig2609: 172479-173644
Sequence    

Annotation

kegg
ID rcu:RCOM_0611830
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_012067792.1
description PREDICTED: UDP-glycosyltransferase 71D1-like [Jatropha curcas]
swissprot
ID O82383
description UDP-glycosyltransferase 71D1 OS=Arabidopsis thaliana GN=UGT71D1 PE=2 SV=1
trembl
ID B9SI10
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_0611830 PE=3 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 71d1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002609_230 0.0 - - PREDICTED: UDP-glycosyltransferase 71D1-like [Jatropha curcas]
2 Hb_001157_010 0.1203893511 - - deoxyhypusine synthase, putative [Ricinus communis]
3 Hb_032803_010 0.1243580074 - - PREDICTED: glycosyltransferase-like At2g41451 [Jatropha curcas]
4 Hb_007594_120 0.1253012552 transcription factor TF Family: MIKC MADS-box transcription factor 2 [Hevea brasiliensis]
5 Hb_000272_070 0.1261053141 - - snare protein YKt [Hevea brasiliensis]
6 Hb_000975_300 0.1276573167 - - Rab2 [Hevea brasiliensis]
7 Hb_005841_050 0.1365883996 - - PREDICTED: F-box protein SKIP1-like [Jatropha curcas]
8 Hb_002876_120 0.13677031 - - PREDICTED: protein-tyrosine-phosphatase PTP1 isoform X1 [Jatropha curcas]
9 Hb_003938_180 0.1405255382 - - lesion inducing family protein [Populus trichocarpa]
10 Hb_002217_450 0.1416340828 - - PREDICTED: probable prefoldin subunit 3 [Jatropha curcas]
11 Hb_000330_070 0.1424286194 - - PREDICTED: proteasome subunit alpha type-1-B-like [Gossypium raimondii]
12 Hb_000963_180 0.1435242856 - - calcium/calmodulin-dependent protein kinase kinase, putative [Ricinus communis]
13 Hb_000069_550 0.1438461685 - - PREDICTED: uncharacterized protein LOC104596457 isoform X1 [Nelumbo nucifera]
14 Hb_020419_020 0.1438550108 - - PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera]
15 Hb_020301_040 0.1444973703 - - PREDICTED: mitochondrial substrate carrier family protein P [Jatropha curcas]
16 Hb_002182_030 0.1446642191 - - hypothetical protein Csa_5G139175 [Cucumis sativus]
17 Hb_005496_010 0.1457920638 - - PREDICTED: PXMP2/4 family protein 4 [Jatropha curcas]
18 Hb_001141_030 0.1460907759 - - hypothetical protein PRUPE_ppa024854mg [Prunus persica]
19 Hb_000023_340 0.1468712957 - - PREDICTED: enhancer of rudimentary homolog [Jatropha curcas]
20 Hb_006573_220 0.1472324031 - - PREDICTED: trafficking protein particle complex subunit 1 [Jatropha curcas]

Gene co-expression network

sample Hb_002609_230 Hb_002609_230 Hb_001157_010 Hb_001157_010 Hb_002609_230--Hb_001157_010 Hb_032803_010 Hb_032803_010 Hb_002609_230--Hb_032803_010 Hb_007594_120 Hb_007594_120 Hb_002609_230--Hb_007594_120 Hb_000272_070 Hb_000272_070 Hb_002609_230--Hb_000272_070 Hb_000975_300 Hb_000975_300 Hb_002609_230--Hb_000975_300 Hb_005841_050 Hb_005841_050 Hb_002609_230--Hb_005841_050 Hb_001314_040 Hb_001314_040 Hb_001157_010--Hb_001314_040 Hb_003326_020 Hb_003326_020 Hb_001157_010--Hb_003326_020 Hb_002876_120 Hb_002876_120 Hb_001157_010--Hb_002876_120 Hb_000239_030 Hb_000239_030 Hb_001157_010--Hb_000239_030 Hb_006569_100 Hb_006569_100 Hb_001157_010--Hb_006569_100 Hb_000530_070 Hb_000530_070 Hb_001157_010--Hb_000530_070 Hb_027073_050 Hb_027073_050 Hb_032803_010--Hb_027073_050 Hb_000963_180 Hb_000963_180 Hb_032803_010--Hb_000963_180 Hb_000069_550 Hb_000069_550 Hb_032803_010--Hb_000069_550 Hb_000431_010 Hb_000431_010 Hb_032803_010--Hb_000431_010 Hb_032803_010--Hb_006569_100 Hb_032803_010--Hb_007594_120 Hb_007594_120--Hb_002876_120 Hb_007594_120--Hb_000975_300 Hb_007594_120--Hb_000069_550 Hb_000062_340 Hb_000062_340 Hb_007594_120--Hb_000062_340 Hb_020301_040 Hb_020301_040 Hb_007594_120--Hb_020301_040 Hb_024714_060 Hb_024714_060 Hb_007594_120--Hb_024714_060 Hb_006573_220 Hb_006573_220 Hb_000272_070--Hb_006573_220 Hb_001687_040 Hb_001687_040 Hb_000272_070--Hb_001687_040 Hb_000398_160 Hb_000398_160 Hb_000272_070--Hb_000398_160 Hb_000069_100 Hb_000069_100 Hb_000272_070--Hb_000069_100 Hb_003561_030 Hb_003561_030 Hb_000272_070--Hb_003561_030 Hb_003938_180 Hb_003938_180 Hb_000272_070--Hb_003938_180 Hb_000975_300--Hb_000062_340 Hb_000975_300--Hb_020301_040 Hb_000975_300--Hb_000963_180 Hb_002182_030 Hb_002182_030 Hb_000975_300--Hb_002182_030 Hb_000975_300--Hb_002876_120 Hb_002217_450 Hb_002217_450 Hb_005841_050--Hb_002217_450 Hb_146225_010 Hb_146225_010 Hb_005841_050--Hb_146225_010 Hb_001638_020 Hb_001638_020 Hb_005841_050--Hb_001638_020 Hb_001141_030 Hb_001141_030 Hb_005841_050--Hb_001141_030 Hb_017862_010 Hb_017862_010 Hb_005841_050--Hb_017862_010 Hb_021409_090 Hb_021409_090 Hb_005841_050--Hb_021409_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.04659 0.0521308 0.623983 1.13807 1.23054 0.868495
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.99003 4.46654 3.94353 0.745254 0.207097

CAGE analysis