Hb_002626_060

Information

Type -
Description -
Location Contig2626: 61542-61856
Sequence    

Annotation

kegg
ID mdm:103451216
description disease resistance protein RGA2-like
nr
ID KDP43110.1
description hypothetical protein JCGZ_27059 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LF20
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27059 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002626_060 0.0 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
2 Hb_009070_010 0.1071754728 - - Spermidine synthase, putative [Ricinus communis]
3 Hb_051408_010 0.1123022226 - - calcineurin-like phosphoesterase [Manihot esculenta]
4 Hb_001715_060 0.1139531038 - - PREDICTED: gibberellin 3-beta-dioxygenase 1 [Jatropha curcas]
5 Hb_003427_020 0.1148010427 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
6 Hb_124677_090 0.1180001881 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001638_340 0.1294407244 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001333_030 0.1305171265 - - Abscisic acid 8'-hydroxylase 1 [Theobroma cacao]
9 Hb_001032_080 0.136061081 - - Ankyrin repeat protein [Medicago truncatula]
10 Hb_001022_070 0.136740745 - - cell wall invertase [Manihot esculenta]
11 Hb_004531_130 0.1367491288 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X2 [Jatropha curcas]
12 Hb_000227_300 0.1408714479 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007357_010 0.1416412989 - - cytochrome P450, putative [Ricinus communis]
14 Hb_001221_050 0.142128304 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Jatropha curcas]
15 Hb_000000_320 0.1436133724 - - PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
16 Hb_007426_190 0.1448075612 - - PREDICTED: uncharacterized protein LOC103325200 [Prunus mume]
17 Hb_008895_020 0.1455524465 - - Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative [Theobroma cacao]
18 Hb_059275_010 0.1459342536 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
19 Hb_150573_010 0.1477062287 transcription factor TF Family: LIM Cysteine and glycine-rich protein, putative [Ricinus communis]
20 Hb_006196_030 0.1521317326 - - PREDICTED: uncharacterized protein LOC105650679 [Jatropha curcas]

Gene co-expression network

sample Hb_002626_060 Hb_002626_060 Hb_009070_010 Hb_009070_010 Hb_002626_060--Hb_009070_010 Hb_051408_010 Hb_051408_010 Hb_002626_060--Hb_051408_010 Hb_001715_060 Hb_001715_060 Hb_002626_060--Hb_001715_060 Hb_003427_020 Hb_003427_020 Hb_002626_060--Hb_003427_020 Hb_124677_090 Hb_124677_090 Hb_002626_060--Hb_124677_090 Hb_001638_340 Hb_001638_340 Hb_002626_060--Hb_001638_340 Hb_000227_300 Hb_000227_300 Hb_009070_010--Hb_000227_300 Hb_009070_010--Hb_051408_010 Hb_004531_130 Hb_004531_130 Hb_009070_010--Hb_004531_130 Hb_000000_320 Hb_000000_320 Hb_009070_010--Hb_000000_320 Hb_004112_070 Hb_004112_070 Hb_009070_010--Hb_004112_070 Hb_051408_010--Hb_000227_300 Hb_001032_080 Hb_001032_080 Hb_051408_010--Hb_001032_080 Hb_001333_030 Hb_001333_030 Hb_051408_010--Hb_001333_030 Hb_007426_190 Hb_007426_190 Hb_051408_010--Hb_007426_190 Hb_059275_010 Hb_059275_010 Hb_001715_060--Hb_059275_010 Hb_001715_060--Hb_001638_340 Hb_007357_010 Hb_007357_010 Hb_001715_060--Hb_007357_010 Hb_029977_030 Hb_029977_030 Hb_001715_060--Hb_029977_030 Hb_008895_020 Hb_008895_020 Hb_001715_060--Hb_008895_020 Hb_001715_060--Hb_124677_090 Hb_001221_050 Hb_001221_050 Hb_003427_020--Hb_001221_050 Hb_021576_160 Hb_021576_160 Hb_003427_020--Hb_021576_160 Hb_001022_070 Hb_001022_070 Hb_003427_020--Hb_001022_070 Hb_002804_070 Hb_002804_070 Hb_003427_020--Hb_002804_070 Hb_003427_020--Hb_000000_320 Hb_005946_200 Hb_005946_200 Hb_003427_020--Hb_005946_200 Hb_001477_060 Hb_001477_060 Hb_124677_090--Hb_001477_060 Hb_124677_090--Hb_008895_020 Hb_124677_090--Hb_007357_010 Hb_124677_090--Hb_001638_340 Hb_054926_010 Hb_054926_010 Hb_124677_090--Hb_054926_010 Hb_011574_020 Hb_011574_020 Hb_001638_340--Hb_011574_020 Hb_001638_340--Hb_008895_020 Hb_001638_340--Hb_001477_060 Hb_000012_350 Hb_000012_350 Hb_001638_340--Hb_000012_350 Hb_001638_340--Hb_059275_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.21374 36.4342 66.4783 85.8586 1.07707 1.70165
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.480357 17.8245

CAGE analysis