Hb_002636_140

Information

Type -
Description -
Location Contig2636: 126001-128729
Sequence    

Annotation

kegg
ID pop:POPTR_0010s14690g
description POPTRDRAFT_769757; hypothetical protein
nr
ID XP_011015618.1
description PREDICTED: GDSL esterase/lipase At1g71691-like [Populus euphratica]
swissprot
ID Q9SIF5
description GDSL esterase/lipase At2g03980 OS=Arabidopsis thaliana GN=At2g03980 PE=2 SV=1
trembl
ID B9HWT7
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s14690g PE=4 SV=1
Gene Ontology
ID GO:0016787
description gdsl esterase lipase 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002636_140 0.0 - - PREDICTED: GDSL esterase/lipase At1g71691-like [Populus euphratica]
2 Hb_002108_020 0.081854559 - - hypothetical protein JCGZ_16012 [Jatropha curcas]
3 Hb_022425_020 0.0838481703 - - -
4 Hb_012675_020 0.0949340717 - - hypothetical protein CISIN_1g018227mg [Citrus sinensis]
5 Hb_000134_100 0.1445951751 - - PREDICTED: putative disease resistance protein RGA1 [Prunus mume]
6 Hb_168451_010 0.1735302208 - - PREDICTED: acid phosphatase 1-like [Populus euphratica]
7 Hb_053224_010 0.1735359721 - - PREDICTED: protein argonaute 16 isoform X2 [Jatropha curcas]
8 Hb_003784_030 0.1735735444 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001021_190 0.1736743621 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
10 Hb_032907_020 0.1737098334 - - calmodulin binding protein, putative [Ricinus communis]
11 Hb_000295_140 0.1737514025 - - PREDICTED: uncharacterized protein LOC105628741 [Jatropha curcas]
12 Hb_011515_020 0.1738104381 - - PREDICTED: dehydration-responsive element-binding protein 1F-like [Jatropha curcas]
13 Hb_086720_010 0.1739025694 - - CTV.19 [Citrus trifoliata]
14 Hb_007407_020 0.1739761664 - - ATP binding protein, putative [Ricinus communis]
15 Hb_077165_010 0.174333131 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000005_150 0.1744182308 - - PREDICTED: cation/H(+) antiporter 10-like [Jatropha curcas]
17 Hb_002383_010 0.1745239484 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
18 Hb_138485_010 0.1747099415 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Populus euphratica]
19 Hb_012758_020 0.175034652 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
20 Hb_005858_010 0.1752948805 transcription factor TF Family: HB hypothetical protein JCGZ_12260 [Jatropha curcas]

Gene co-expression network

sample Hb_002636_140 Hb_002636_140 Hb_002108_020 Hb_002108_020 Hb_002636_140--Hb_002108_020 Hb_022425_020 Hb_022425_020 Hb_002636_140--Hb_022425_020 Hb_012675_020 Hb_012675_020 Hb_002636_140--Hb_012675_020 Hb_000134_100 Hb_000134_100 Hb_002636_140--Hb_000134_100 Hb_168451_010 Hb_168451_010 Hb_002636_140--Hb_168451_010 Hb_053224_010 Hb_053224_010 Hb_002636_140--Hb_053224_010 Hb_002108_020--Hb_000134_100 Hb_002108_020--Hb_012675_020 Hb_002108_020--Hb_022425_020 Hb_001916_010 Hb_001916_010 Hb_002108_020--Hb_001916_010 Hb_004907_040 Hb_004907_040 Hb_002108_020--Hb_004907_040 Hb_001366_280 Hb_001366_280 Hb_022425_020--Hb_001366_280 Hb_022425_020--Hb_012675_020 Hb_002942_170 Hb_002942_170 Hb_022425_020--Hb_002942_170 Hb_009225_030 Hb_009225_030 Hb_022425_020--Hb_009225_030 Hb_012675_020--Hb_000134_100 Hb_002534_140 Hb_002534_140 Hb_012675_020--Hb_002534_140 Hb_001689_060 Hb_001689_060 Hb_012675_020--Hb_001689_060 Hb_000134_100--Hb_001916_010 Hb_000134_100--Hb_004907_040 Hb_122741_010 Hb_122741_010 Hb_000134_100--Hb_122741_010 Hb_168451_010--Hb_053224_010 Hb_032907_020 Hb_032907_020 Hb_168451_010--Hb_032907_020 Hb_000295_140 Hb_000295_140 Hb_168451_010--Hb_000295_140 Hb_003784_030 Hb_003784_030 Hb_168451_010--Hb_003784_030 Hb_086720_010 Hb_086720_010 Hb_168451_010--Hb_086720_010 Hb_007407_020 Hb_007407_020 Hb_168451_010--Hb_007407_020 Hb_053224_010--Hb_032907_020 Hb_053224_010--Hb_000295_140 Hb_053224_010--Hb_003784_030 Hb_053224_010--Hb_086720_010 Hb_053224_010--Hb_007407_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.259396 0.401166 0 0.0413553
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis